Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563757

Identifier: 108563757

GI number: 108563757

Start: 1382139

End: 1382348

Strand: Reverse

Name: 108563757

Synonym: HPAG1_1332

Alternate gene names: NA

Gene position: 1382348-1382139 (Counterclockwise)

Preceding gene: 108563758

Following gene: 108563754

Centisome position: 86.59

GC content: 22.86

Gene sequence:

>210_bases
ATGGATTTAAGAAAAAAGTTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTATTCTTTAT
TCTTTATTCTTTATTCTTTATTCTTTATTCTTCCGCTGGTGATTGCTTTTTATTTCTTTTATTTTTAACTTTTTTAGTTG
GGGTTGGTATGGGGTTGTGTTTGAATGGTTTTTGTGTTTTAGATTTTTAG

Upstream 100 bases:

>100_bases
AGCGATAAAATAAAACTTAAAATCATAACATAAGATCTAAAATCCAATTTTTTAGAAAGTTTAATATCTTTGGTGAGAAA
AGAGTCTGCATCAATTAAAC

Downstream 100 bases:

>100_bases
AACCGATCTAAAAGAAAACTTTTTCATCAAGTTTCTTTTTTAAAAAAGCCTAAAAATTTCCTAAACACTTCTTTAGGATC
GTATGTATCACACACCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLCLNGFCVLDF

Sequences:

>Translated_69_residues
MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLCLNGFCVLDF
>Mature_69_residues
MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLCLNGFCVLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8139; Mature: 8139

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LNGFCVLDF
HCCCHHCCC
>Mature Secondary Structure
MDLRKKFYSLFFILYSLFFILYSLFFILYSLFFILYSSAGDCFLFLLFLTFLVGVGMGLC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LNGFCVLDF
HCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA