| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is mreB [H]
Identifier: 108563743
GI number: 108563743
Start: 1365991
End: 1367034
Strand: Reverse
Name: mreB [H]
Synonym: HPAG1_1318
Alternate gene names: 108563743
Gene position: 1367034-1365991 (Counterclockwise)
Preceding gene: 108563744
Following gene: 108563742
Centisome position: 85.63
GC content: 47.03
Gene sequence:
>1044_bases ATGATTTTTAGCAAATTGATCGGTTTGTTTTCGCATGATATTGCCATAGATTTAGGCACGGCTAACACGATCGTGTTAGT CAAAGGGCAGGGCATTATTATCAATGAACCTTCTATTGTGGCGGTGCGCATGGGATTGTTTGATTCTAAAGCTTATGATA TTTTAGCAGTGGGGAGCGAGGCTAAGGAAATGCTAGGCAAAACCCCTAACAGCATCAGAGCGATTCGCCCCATGAAAGAT GGCGTGATCGCCGATTATGACATTACCGCTAAAATGATCCGCTACTTTATTGAAAAAGCGCACAAACGAAAAACATGGAT CCGCCCGCGCATCATGGTATGCGTGCCTTATGGGTTGACGAGCGTGGAAAGGAATGCGGTTAAAGAGAGCGCTTTAAGCG CTGGGGCTAGAGAAGTCTTTTTGATTGAAGAGCCTATGGCAGCCGCGATCGGGGCAGGCTTACCGGTGAAAGAACCGCAA GGGAGTTTGATTGTAGATATTGGCGGCGGCACGACTGAAATTGGCGTGATTAGCCTTGGGGGGTTAGTCATTTCTAAAAG CATTAGAGTGGCCGGGGATAAATTGGATCAAAGCATCGTGGAATACATCCGCAAAAAATTCAATCTGTTGATAGGGGAGC GCACCGGCGAAGAGATTAAGATTGAAATCGGTTGCGCGATCAAATTGGATCCGCCTCTTACCATGGAAGTGTCAGGGAGG GATCAAGTGAGCGGGCTGTTGCACACGATTGAATTGAGCTCTGATGATGTGTTTGAAGCCATTAAAGATCAGGTGAGGGA AATCTCTAGCGCTTTAAGGAGCGTGCTTGAAGAAGTGAAGCCGGATTTAGCGAAAGACATTGTGCAAAATGGCGTGGTGC TTACCGGCGGTGGGGCTTTGATTAAGGGCTTAGACAAGTATTTAAGCGATATGGTTAAACTCCCTGTGTATGTGGGCGAT GAGCCTTTATTGGCCGTGGCCAAAGGCACAGGGGAAGCCATACAAGATTTGGATTTACTCAGCCGTGTGGGTTTTAGTGA ATAA
Upstream 100 bases:
>100_bases TTTGAAACAGGCTGAACCTTTGATCATTGCTAAAACGCATTCTAAAATTCTTCCTTAAGGAACACGCTTATAAATTTAAC GATAAAGGATTAGAAAGGGC
Downstream 100 bases:
>100_bases TGCATGCGTTTTTATTTTAAATTCCTTTGGCTTTTAGGGATTTTTCTTATTTTTTATTTTTTAGATATTAAAGGCAGTTC TTCTTATATCAGCGACCGGA
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKD GVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQ GSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGD EPLLAVAKGTGEAIQDLDLLSRVGFSE
Sequences:
>Translated_347_residues MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKD GVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQ GSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGD EPLLAVAKGTGEAIQDLDLLSRVGFSE >Mature_347_residues MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKD GVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQ GSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGD EPLLAVAKGTGEAIQDLDLLSRVGFSE
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=348, Percent_Identity=51.7241379310345, Blast_Score=356, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 37340; Mature: 37340
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSE CHHHHHHHHHHCCEEEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCEEEEEECHH AKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLT HHHHHCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC SVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLG HHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEC GLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR CCCEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEECCCEEEEECCC DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGAL HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEECCHHH IKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE HHHHHHHHHHHHHCCEEECCCCEEEEECCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSE CHHHHHHHHHHCCEEEEECCCCEEEEEECCEEEEECCCEEEEEECCCCCCCEEEEEECHH AKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLT HHHHHCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC SVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLG HHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEEC GLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPPLTMEVSGR CCCEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEECCCEEEEECCC DQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLAKDIVQNGVVLTGGGAL HHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEEECCHHH IKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE HHHHHHHHHHHHHCCEEECCCCEEEEECCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]