| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is trpE [H]
Identifier: 108563655
GI number: 108563655
Start: 1291907
End: 1293409
Strand: Direct
Name: trpE [H]
Synonym: HPAG1_1230
Alternate gene names: 108563655
Gene position: 1291907-1293409 (Clockwise)
Preceding gene: 108563654
Following gene: 108563656
Centisome position: 80.93
GC content: 40.79
Gene sequence:
>1503_bases ATGGTTAGTCTCATAGAAAAAGCCCCTTACATTCCCTACCCCCTAGCTCTTTATGAAAAATTAGAGTGCGAGCACACTTT GCTTTTTGAAAGCGCTGAGATTGAGAGCAAAGCGCACACCAAATCCCTTTTAATGGCTAAAGCCTGTTTGAAGCTCATTT GCAACCACAATATCGTAACTATCACTAGCCTGACGCCTAATGGTGGGGCGTTTTTGCAAAAATTGAGCGCGTTTTTTAAA ACGCCTATACAAGACAATGCCCTAATTTTAACCTACACCAAAAATAGAAAAACGCAAGATGAGTTTTTAAAGCTCTTTGA GCCTAGCCCTTTTGACGCTTTAAGGGGGCTTTTTAAAAGCGTTAAAACAAAACCCAAACACCCCTTTACGCTTTTAAGCG CAGGCGTTTTTTCTTTTGAAATGCTCAATTTTTTTGAAGACTTGCCCCACTTAAAAGCAAAAGACAACACAGCGCATGAC TTTATTTTTTTTGTCGCGCAAAATTTGATCATCATAGATCATAAAGAAAAAAGCGCTGAAATCTTGGGGGCGTGTTTTGA TGAACGCTTTAAAACAGAGATAGCCCAGGAATTACAGGATTTAAAAGAGTTGGCTAAAAACATTAAAAGCGATTTTATCC CTAAAAAAGCTAAGCAAAGTAAAGAAGTTAGCGTTAGTTGCGATGATAGCGAGTTTGAAAAAAGGGTGCTGTCCTTACAA GAAGAAATCAAAAAGGGCGAGATTTTTCAAGCGGTGTTGTCGCGCAGCTTTTATATGGAGTGCTTGGAGGGTTTGAGTGC GTATTATCATTTAAAACTAACTAACCCTAGCCCTTATATGTTCTATATTAAAGACAGCGATTTTATCCTTTTTGGGGCAA GCCCTGAGAGCGCTTTAAAATACAACGCCTTAACGAATACGGCTGAAATTTATCCCATTGCTGGCACTCGTTTAAGAGGT AAGGACAAACAAGGGAATATTGATTACGATTTGGATAGTAAAATGGAATTTGATTTGCAACACGACTATAAAGAAAGGGC TGAACACATCATGCTAGTGGATTTAGCCAGAAACGACATGGCCAGAGTTTCAAAAAAGCGCTATTGCGACAAGCTTTTAA AGGTGGATAAATATTCCAATGTCATGCATTTAGTTTCAAGGGTTGTGGGGGAATTGAAAAAAGGGTGCGATAGTTTGCAT GCTTACAGGAGTTTTATGAACGCCGGCACGCTTAGCGGGGCGCCTAAAATCTCTGCGATCAGGCTCATTTACCAATTAGA AAAGCAAAGGAGAGGCTCTTATGGGGGGAGTGTGGGGTATTTAAACAGCGAGGGTTCTATGGATTCTTGCATCACCATCC GTTCATGTTTTGTCAAAAACAATAGAGCGGTGATCCAAGCAGGAGCCGGTATCGTGTTAGACAGCGTGCCGCAAAACGAA GCGAATGAAACGAGAGCCAAAGCGCAAGCCCTTATTGATGCGATCAGGAAAACAAGCTTATGA
Upstream 100 bases:
>100_bases AAGTTAGATTAGCCCTTGCAAGCTCTATAAGGCTATTAATTTATTTCCTATTTATCTATTTCTTGTAGAATACGAGTTTA TTTTTAGCGTAAAGAAATTG
Downstream 100 bases:
>100_bases AAATCTTTTTTATAGATAATTTTGATTCTTTCTCTTATAATTTGGTGTATGAATTAGAGTGTTTGGGTTATGAAGTGGCC GTTTATCAAAACGATATTGA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MVSLIEKAPYIPYPLALYEKLECEHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKLSAFFK TPIQDNALILTYTKNRKTQDEFLKLFEPSPFDALRGLFKSVKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHD FIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIAQELQDLKELAKNIKSDFIPKKAKQSKEVSVSCDDSEFEKRVLSLQ EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALKYNALTNTAEIYPIAGTRLRG KDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLH AYRSFMNAGTLSGAPKISAIRLIYQLEKQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNE ANETRAKAQALIDAIRKTSL
Sequences:
>Translated_500_residues MVSLIEKAPYIPYPLALYEKLECEHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKLSAFFK TPIQDNALILTYTKNRKTQDEFLKLFEPSPFDALRGLFKSVKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHD FIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIAQELQDLKELAKNIKSDFIPKKAKQSKEVSVSCDDSEFEKRVLSLQ EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALKYNALTNTAEIYPIAGTRLRG KDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLH AYRSFMNAGTLSGAPKISAIRLIYQLEKQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNE ANETRAKAQALIDAIRKTSL >Mature_500_residues MVSLIEKAPYIPYPLALYEKLECEHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVTITSLTPNGGAFLQKLSAFFK TPIQDNALILTYTKNRKTQDEFLKLFEPSPFDALRGLFKSVKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHD FIFFVAQNLIIIDHKEKSAEILGACFDERFKTEIAQELQDLKELAKNIKSDFIPKKAKQSKEVSVSCDDSEFEKRVLSLQ EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALKYNALTNTAEIYPIAGTRLRG KDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLH AYRSFMNAGTLSGAPKISAIRLIYQLEKQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNE ANETRAKAQALIDAIRKTSL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=498, Percent_Identity=45.9839357429719, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1788114, Length=397, Percent_Identity=27.455919395466, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1786809, Length=220, Percent_Identity=27.7272727272727, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=281, Percent_Identity=42.7046263345196, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6324361, Length=374, Percent_Identity=23.5294117647059, Blast_Score=85, Evalue=3e-17,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 56532; Mature: 56532
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLIEKAPYIPYPLALYEKLECEHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVT CCCCHHCCCCCCCCHHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ITSLTPNGGAFLQKLSAFFKTPIQDNALILTYTKNRKTQDEFLKLFEPSPFDALRGLFKS EEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHH VKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHDFIFFVAQNLIIIDHKEKSAE HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHH ILGACFDERFKTEIAQELQDLKELAKNIKSDFIPKKAKQSKEVSVSCDDSEFEKRVLSLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCHHHHHHHHHHH EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALK HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCHHHE YNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDM ECCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCEECCHHHHHHHHCCEEEEEEHHHHHH ARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RLIYQLEKQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNE HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCC ANETRAKAQALIDAIRKTSL CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSLIEKAPYIPYPLALYEKLECEHTLLFESAEIESKAHTKSLLMAKACLKLICNHNIVT CCCCHHCCCCCCCCHHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ITSLTPNGGAFLQKLSAFFKTPIQDNALILTYTKNRKTQDEFLKLFEPSPFDALRGLFKS EEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHH VKTKPKHPFTLLSAGVFSFEMLNFFEDLPHLKAKDNTAHDFIFFVAQNLIIIDHKEKSAE HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEECCCHHHH ILGACFDERFKTEIAQELQDLKELAKNIKSDFIPKKAKQSKEVSVSCDDSEFEKRVLSLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCHHHHHHHHHHH EEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLTNPSPYMFYIKDSDFILFGASPESALK HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCHHHE YNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDM ECCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCEECCHHHHHHHHCCEEEEEEHHHHHH ARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH RLIYQLEKQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNE HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCC ANETRAKAQALIDAIRKTSL CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]