Click here to switch to the map view.

The map label for this gene is 108563469

Identifier: 108563469

GI number: 108563469

Start: 1099615

End: 1100811

Strand: Reverse

Name: 108563469

Synonym: HPAG1_1044

Alternate gene names: NA

Gene position: 1100811-1099615 (Counterclockwise)

Preceding gene: 108563471

Following gene: 108563468

Centisome position: 68.96

GC content: 35.51

Gene sequence:

>1197_bases
ATGACTTCATCTTCAAGCCATTCTTTTAAAGAACAAGATTTTCATATCCCTATCGCTTTTGCTTTTGATAAGAATTACCT
CATTCCTGCGGGCGCGTGTCTTTATTCCTTGCTAGAAAGCATCGCTAAAGCCAATAAAAAAATCCGCTACACCCTACACG
CTTTAGTGGTGGGCTTGAATGAAGAAGATAAAGCAAAACTCCACCAAATCACAGAGCCTTTTAAAGAATTTGCTGCTTTA
GAAGTGAGAGATATTGAACCTTTTTTAGACGCTATCCCTAACCCTTTTGATGAGGATTTCACCAAGCGTTTTTCTAAAAT
GGTGTTAGTGAAATATTTTCTAGCGGATTTATTCCCCAAATATTCTAAAATGGTGTGGAGCGATGTGGATGTTATCTTTT
GCAATGAATTTAGCGCTGATTTCTTAAACATTAAAGAAAATGATGAGAATTATTTTTATGGGGTTTTGGAAGTTGAAAAG
CACCACATGATGGAAGGGTTTTTGTTTTGTAATTTAGATTACCAACGCAAGAAAAATTTCACCTTAAGAATGCATGATCT
TTTAAAGGGGAATGAGGCTAAAGGGGAGTTGGATTTTACGAAATGGTGTTGGCCTAACATGAAAGCTTTAGGGATTGAAT
ATTGCGTTTTCCCTTATTATTACACCATTAAAGATTTTTCTAATGCGTATTTAAACGAGAATTACAAGAAAACCATTTTA
GAGGCGCTCAAAAACCCTACCATTATCCACTATGACGCTTGGTGGGGAGCAGTGAAGCCTTGGGACTATCCTTTTGGTTT
GAAAGCGGATTTATGGCTGAACGCTTTGGCTAAAACCCCCTTTATGAGCGATTACACTAAGAAAATGCACACCAATGAGA
GCTTTTATACCACAAAAATGGCTGAGCAGCATTATTTTTCTTCAGTAAAGTCTTCAAAAGAAATTGTTTTTAAGGCTCCG
TATTTGTTTTTCAAATCGTATCTGTTTGTTGTGTTTAAAGAAAGGAAAATCCATTCAAGAGTTTTTGAATTAACTTGTAA
TTTAGTGAAAAAATTTTTCAATAAGCTTATTTATTTTGGGTTTTTGATGCCTAAAGCGTTAGCTAAAAGGGTGGTTAGTA
AGATCCTTAGAGTTTTAGGGCTTCATGGGATTGTGAAAAAAATCTTAATCAAGCTCAAGCTTTTAAGAAAGGGCTAG

Upstream 100 bases:

>100_bases
GCTTTAAAAACAGCATAAAAACCAAAAACAGAACCCTTTCAAGTTCGGTTTTTTTTTTTTTTGGATAAAATAGCCATTAA
AAAAGGGTATTTAATTTTTT

Downstream 100 bases:

>100_bases
AGTAAAGGGGTTAAAACCTTTCTTTAAATTAATTTGCTTTAAAAACAGCATAAAAACCAAAAACAGAACCCTTTCAAGTT
CGGTTTTTTTTTTTTTTTTG

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Lipopolysaccharide 1 2-Glucosyltransferase; Glycosyl Transferase Family Protein; LPS 1 2-Glycosyltransferase; Lps Biosynthesis Protein

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTSSSSHSFKEQDFHIPIAFAFDKNYLIPAGACLYSLLESIAKANKKIRYTLHALVVGLNEEDKAKLHQITEPFKEFAAL
EVRDIEPFLDAIPNPFDEDFTKRFSKMVLVKYFLADLFPKYSKMVWSDVDVIFCNEFSADFLNIKENDENYFYGVLEVEK
HHMMEGFLFCNLDYQRKKNFTLRMHDLLKGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL
EALKNPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNESFYTTKMAEQHYFSSVKSSKEIVFKAP
YLFFKSYLFVVFKERKIHSRVFELTCNLVKKFFNKLIYFGFLMPKALAKRVVSKILRVLGLHGIVKKILIKLKLLRKG

Sequences:

>Translated_398_residues
MTSSSSHSFKEQDFHIPIAFAFDKNYLIPAGACLYSLLESIAKANKKIRYTLHALVVGLNEEDKAKLHQITEPFKEFAAL
EVRDIEPFLDAIPNPFDEDFTKRFSKMVLVKYFLADLFPKYSKMVWSDVDVIFCNEFSADFLNIKENDENYFYGVLEVEK
HHMMEGFLFCNLDYQRKKNFTLRMHDLLKGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL
EALKNPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNESFYTTKMAEQHYFSSVKSSKEIVFKAP
YLFFKSYLFVVFKERKIHSRVFELTCNLVKKFFNKLIYFGFLMPKALAKRVVSKILRVLGLHGIVKKILIKLKLLRKG
>Mature_397_residues
TSSSSHSFKEQDFHIPIAFAFDKNYLIPAGACLYSLLESIAKANKKIRYTLHALVVGLNEEDKAKLHQITEPFKEFAALE
VRDIEPFLDAIPNPFDEDFTKRFSKMVLVKYFLADLFPKYSKMVWSDVDVIFCNEFSADFLNIKENDENYFYGVLEVEKH
HMMEGFLFCNLDYQRKKNFTLRMHDLLKGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTILE
ALKNPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNESFYTTKMAEQHYFSSVKSSKEIVFKAPY
LFFKSYLFVVFKERKIHSRVFELTCNLVKKFFNKLIYFGFLMPKALAKRVVSKILRVLGLHGIVKKILIKLKLLRKG

Specific function: Unknown

COG id: COG1442

COG function: function code M; Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46884; Mature: 46753

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSSSHSFKEQDFHIPIAFAFDKNYLIPAGACLYSLLESIAKANKKIRYTLHALVVGLN
CCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHEEEEHHEEECC
EEDKAKLHQITEPFKEFAALEVRDIEPFLDAIPNPFDEDFTKRFSKMVLVKYFLADLFPK
CHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YSKMVWSDVDVIFCNEFSADFLNIKENDENYFYGVLEVEKHHMMEGFLFCNLDYQRKKNF
HHHHHHCCCCEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHHCEEEEEECCHHHCCCC
TLRMHDLLKGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL
EEEEHHHHCCCCCCCCCCCHHHCCCCCHHHCCEEEHHCCEEEHHHHHHHHHCCCHHHHHH
EALKNPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNESFYTTKM
HHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH
AEQHYFSSVKSSKEIVFKAPYLFFKSYLFVVFKERKIHSRVFELTCNLVKKFFNKLIYFG
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMPKALAKRVVSKILRVLGLHGIVKKILIKLKLLRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSSSSHSFKEQDFHIPIAFAFDKNYLIPAGACLYSLLESIAKANKKIRYTLHALVVGLN
CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHEEEEHHEEECC
EEDKAKLHQITEPFKEFAALEVRDIEPFLDAIPNPFDEDFTKRFSKMVLVKYFLADLFPK
CHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YSKMVWSDVDVIFCNEFSADFLNIKENDENYFYGVLEVEKHHMMEGFLFCNLDYQRKKNF
HHHHHHCCCCEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHHCEEEEEECCHHHCCCC
TLRMHDLLKGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL
EEEEHHHHCCCCCCCCCCCHHHCCCCCHHHCCEEEHHCCEEEHHHHHHHHHCCCHHHHHH
EALKNPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNESFYTTKM
HHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH
AEQHYFSSVKSSKEIVFKAPYLFFKSYLFVVFKERKIHSRVFELTCNLVKKFFNKLIYFG
HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLMPKALAKRVVSKILRVLGLHGIVKKILIKLKLLRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA