| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is lgt [H]
Identifier: 108563364
GI number: 108563364
Start: 980374
End: 981213
Strand: Reverse
Name: lgt [H]
Synonym: HPAG1_0939
Alternate gene names: 108563364
Gene position: 981213-980374 (Counterclockwise)
Preceding gene: 108563365
Following gene: 108563363
Centisome position: 61.47
GC content: 39.88
Gene sequence:
>840_bases ATGAACGCTTGGAATACGATTTATGATCAATTTAACCCTATCGCTTTTAGTCTTGGCAGTATTGAAGTGCATTGGTATGG TTTGGCGTATGCGTGCGCGATTGTTACCGCTTTTTATATGGCGTTAAGAATGATCCAAAAAGATCCCAAGCGATTCCCCA TTGAAAGGAAGGAATTTGAGAGTTATTTTCTATGGGCGGAGCTTGGCATTGTGCTAGGGGCAAGGATAGGATACATTCTT ATTTATGAGCCTAATTCCAGCTATTATTTGACGCATTTTTGGCAAATCTTTAACCCTTTTGATAGCCATGGGAATTTTGT AGGCATTCGTGGGATGAGCTATCATGGGGGGTTGGTGGGGTTTTTGATCGCTTCGTATCTTTATAGCCGTAAGGATCTGA AAAAGCTTTTGATTTATTTGGATTTGATTGCGATTAGCCTGCCTTTAGGGTATGTTTTTGGGAGGATTGGGAATTTTTTA AACCAGGAGCTTGTGGGGAGGATTGTCCCCAAAGACAGCCATTTAGGGCAAATCATAGGCATTATGGTGGATAATCAATT GCGTTATCCCAGCCAATTGATTGAAGCGTTTTTAGAGGGGGTTATCGTGTTTTTAATGGTAATGTGGGCTAAAAAACACA CCAAAACGCGTGGGTTGCTGATTGTGGTTTATGGCTTGGGGTATTCCTTGATGCGCTTTATTGCGGAATTTTACAGAGAG CCGGATAGCCAAATGGGGGTTTATTTTTTAAATTTGAGCATGGGGCAGATTTTAAGCTTATTTATGGTAATTGTTTCGTT AGGGATTTTATTGTATGCTACGAAAAATTCTAAAAAATAA
Upstream 100 bases:
>100_bases CTCCGCTAAAAGGTTGATGCTCCATGCGCATAAAATCGCGCTACTAGGGTATGAATTTGAAGCGATCCCCCCTAAAGAAT TTGAATTTTAAGGATTGATC
Downstream 100 bases:
>100_bases AGGAAAATCAATGAAATTTTTGGATCAAGAAAAAAGAAGACGATTATTAAACGAGCGCCATTCTTGCAAGATGTTTGATA GCCATTATGAGTTTTCTAGC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARIGYIL IYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL NQELVGRIVPKDSHLGQIIGIMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK
Sequences:
>Translated_279_residues MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARIGYIL IYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL NQELVGRIVPKDSHLGQIIGIMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK >Mature_279_residues MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFESYFLWAELGIVLGARIGYIL IYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVGFLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFL NQELVGRIVPKDSHLGQIIGIMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=292, Percent_Identity=30.8219178082192, Blast_Score=147, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 32079; Mature: 32079
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFE CCCHHHHHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SYFLWAELGIVLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVG HHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH FLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFLNQELVGRIVPKDSHLGQIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHC PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK CCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MNAWNTIYDQFNPIAFSLGSIEVHWYGLAYACAIVTAFYMALRMIQKDPKRFPIERKEFE CCCHHHHHHCCCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SYFLWAELGIVLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNFVGIRGMSYHGGLVG HHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH FLIASYLYSRKDLKKLLIYLDLIAISLPLGYVFGRIGNFLNQELVGRIVPKDSHLGQIIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH IMVDNQLRYPSQLIEAFLEGVIVFLMVMWAKKHTKTRGLLIVVYGLGYSLMRFIAEFYRE HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHC PDSQMGVYFLNLSMGQILSLFMVIVSLGILLYATKNSKK CCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA