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The map label for this gene is fecD [C]

Identifier: 108563295

GI number: 108563295

Start: 910076

End: 911056

Strand: Reverse

Name: fecD [C]

Synonym: HPAG1_0870

Alternate gene names: 108563295

Gene position: 911056-910076 (Counterclockwise)

Preceding gene: 108563296

Following gene: 108563294

Centisome position: 57.07

GC content: 46.18

Gene sequence:

>981_bases
ATGCTTAAAACCTATCATATTGCATTAGCTTGCGTGATTTTAGCGGTGGTGGTGCTGTTGTTTGGAGGGGAGTCCTTGAG
TTTGGAAGAATGGCAAGAAGTGTGCCTTAATGTGAAAAACCACTTTTTATACAATGAAGAGCTGAGCTCTTTAAGTGTTA
TTATTTTAGAAATACGATTACCACGAGTGATCTTAGCGCTCCTGGTGGGAGCGAGTTTGTCTGGGAGTGGGGTGGTGATG
CAAACGATTTTTAGAAACCCCTTAGTGGATCCTTTTTTACTAGGGATTTCTAGTGGGGCGATGCTAGGCGTGGCGATGGC
GATAGCGGTAGTGGAGTCTAATATTGCGATTTTGGCGTTTTTTGGGGCGATTTTAGCCAGCCTTGCTGTCTTAGCGATGA
ATAGGGTTTTAGGCAATTCCGTCCTTTCGTTGGTGCTTTCAGGGGTGGTGTTGAGCGCGTTTTTAAGCGCACTTGCCGGA
GCGATAAAATTCTTTGTGATCCCCCAAAAAGCGCAAGCGATTGTCGTGTGGCTTTTAGGGAGCTTGTCTTTGAGCAGTTA
TAAGGATTGCTTGATCGCTTTCATAGGGCTGTCTTTGGGCTTTATCCCGCTTTTTTTGTTAAGGTGGCGTATTAATTTAT
TGAGCTTGAGCGATGCGCAAAGTTTGAGTTTGGGCATTAATCCCGTGCTGTTGCGATCGCTTTGTTTGGTGTGCGTGAGC
GTTGCGAGCGCTTTAGCGGTGAGCGTTTCCGGCACGATTGGCTGGATTGGGTTAGTCATTCCGCATGTGGCTAGGTTGTT
TTTTGGGGCGAATTTGCAAAAACTGCTTTTAAGCTCTTTGTTAATGGGGGCGTTTTTCTTGCTTTTAGCGGATGTGGTGG
CTAAAACCATTACCCCCTATGATTTACCGGTAGGCATTGCGACAAGCGTTTTAGGAGCGCCTTTCTTCTTGTGGCTTCTA
TTTAGGACTAGGGGGGTGTGA

Upstream 100 bases:

>100_bases
ATCGGCTTAAAAACCCAATTATTGCTAGCGTTGTATAGAATCCTCCCGAGTAGTTGGTATGATTCTTTGTTCAGATTAAT
CGTTCTTAAAAGGAAGCGTG

Downstream 100 bases:

>100_bases
TGGTCTTAGAAGTTAAAAACCTGTCCTTTAAATATTCTCAAAAACTCATTTTGGATAAATTGAGTTTTAGCGTGCCAAAA
AACAGCATCACCAGCATTTT

Product: iron(III) dicitrate ABC transporter, permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLKTYHIALACVILAVVVLLFGGESLSLEEWQEVCLNVKNHFLYNEELSSLSVIILEIRLPRVILALLVGASLSGSGVVM
QTIFRNPLVDPFLLGISSGAMLGVAMAIAVVESNIAILAFFGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAG
AIKFFVIPQKAQAIVVWLLGSLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLVCVS
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPYDLPVGIATSVLGAPFFLWLL
FRTRGV

Sequences:

>Translated_326_residues
MLKTYHIALACVILAVVVLLFGGESLSLEEWQEVCLNVKNHFLYNEELSSLSVIILEIRLPRVILALLVGASLSGSGVVM
QTIFRNPLVDPFLLGISSGAMLGVAMAIAVVESNIAILAFFGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAG
AIKFFVIPQKAQAIVVWLLGSLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLVCVS
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPYDLPVGIATSVLGAPFFLWLL
FRTRGV
>Mature_326_residues
MLKTYHIALACVILAVVVLLFGGESLSLEEWQEVCLNVKNHFLYNEELSSLSVIILEIRLPRVILALLVGASLSGSGVVM
QTIFRNPLVDPFLLGISSGAMLGVAMAIAVVESNIAILAFFGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAG
AIKFFVIPQKAQAIVVWLLGSLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLVCVS
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPYDLPVGIATSVLGAPFFLWLL
FRTRGV

Specific function: Part of a binding-protein-dependent transport system for an iron chelatin; probably responsible for the translocation of the substrate across the membrane (Potential) [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=277, Percent_Identity=37.9061371841155, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1790741, Length=282, Percent_Identity=35.1063829787234, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788004, Length=307, Percent_Identity=32.8990228013029, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786805, Length=320, Percent_Identity=32.1875, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786804, Length=294, Percent_Identity=30.2721088435374, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786347, Length=278, Percent_Identity=27.6978417266187, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34636; Mature: 34636

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTYHIALACVILAVVVLLFGGESLSLEEWQEVCLNVKNHFLYNEELSSLSVIILEIRL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH
PRVILALLVGASLSGSGVVMQTIFRNPLVDPFLLGISSGAMLGVAMAIAVVESNIAILAF
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH
FGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAGAIKFFVIPQKAQAIVVWLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
SLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLVCVS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHH
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLPVGIATSVLGAPFFLWLLFRTRGV
CCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKTYHIALACVILAVVVLLFGGESLSLEEWQEVCLNVKNHFLYNEELSSLSVIILEIRL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHH
PRVILALLVGASLSGSGVVMQTIFRNPLVDPFLLGISSGAMLGVAMAIAVVESNIAILAF
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHH
FGAILASLAVLAMNRVLGNSVLSLVLSGVVLSAFLSALAGAIKFFVIPQKAQAIVVWLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH
SLSLSSYKDCLIAFIGLSLGFIPLFLLRWRINLLSLSDAQSLSLGINPVLLRSLCLVCVS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHH
VASALAVSVSGTIGWIGLVIPHVARLFFGANLQKLLLSSLLMGAFFLLLADVVAKTITPY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLPVGIATSVLGAPFFLWLLFRTRGV
CCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]