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The map label for this gene is cdh [H]

Identifier: 108563279

GI number: 108563279

Start: 888140

End: 888874

Strand: Reverse

Name: cdh [H]

Synonym: HPAG1_0854

Alternate gene names: 108563279

Gene position: 888874-888140 (Counterclockwise)

Preceding gene: 108563281

Following gene: 108563278

Centisome position: 55.68

GC content: 41.77

Gene sequence:

>735_bases
ATGAAAAAAGCGGGCTTTCTTTTTTTAGCGGTAATGGCTATCGTTGTCATGAGTTTAAACGCTAAAGATCCGAATGTGTT
GCGTAAGATTGTTTTTGAGAAATGTCTGCCTAATTATGAGAAAAATCAGAATCCTTCGCCATGCATAGAAGTCAAACCCG
ATGCCGGCTATGTGGTTTTAAAAGATATTAACGGCCCGTTGCAATATTTGTTGATGCCAACAACTCACATTAGTGGTATT
GAAAGCCCTTTGTTGCTTGATTTTTCCACGCCTAACTTTTTTTATTTATCCTGGCAAGCGCGTGATTTTATGAGTAAAAA
ATACGGCAAACCCATTCCTGATAGTGCGATTTCTTTGACGATTAACTCTAGCAAAGGGCGATCGCAAAACCATTTTCATA
TCCATATCTCTTGCATTAGTCTTGAAGCGCGCAAACAGCTGGACAATAATCTAAAAAAAATCAACAGCCGTTGGTCGCCA
TTATCAGGTGGCTTGAACGGGCATAAATATTTGGCGCGTCGGGTAACAGAGAGCGAACTGGCGCAAAAAAGCCCCTTTAT
CATGCTTGCTAAAGAAGCGCCTAATGCACATAAACGCATGGGAGACTATGGCTTGGCGGTGGTGCAACAAAGCGATAACT
CCTTTGTCTTGTTAGCGACACGATTTAACCCATTGACTTCCAATCGCGCTTCAGCCGAAGAGATTCAAGATCATGAATGC
ACGATTTTGCGTTAA

Upstream 100 bases:

>100_bases
TTATTAAAATAATCATAATGATTAAAGATTTTAACCACTATTGTAGAAAAATAACGAGAGGGTTTGTAAAAACTCTCATT
AAAAACAAGGAGCAAAAAAG

Downstream 100 bases:

>100_bases
GGTGAGTTAAGTTCTAAATTTGAGCGATAACCTTTAAAAAGCGTAATTAAGGGGTGGTGTTACAAAACCCCTTATTTTTT
TATAAATTTGACTAACCCTT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKKAGFLFLAVMAIVVMSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVLKDINGPLQYLLMPTTHISGI
ESPLLLDFSTPNFFYLSWQARDFMSKKYGKPIPDSAISLTINSSKGRSQNHFHIHISCISLEARKQLDNNLKKINSRWSP
LSGGLNGHKYLARRVTESELAQKSPFIMLAKEAPNAHKRMGDYGLAVVQQSDNSFVLLATRFNPLTSNRASAEEIQDHEC
TILR

Sequences:

>Translated_244_residues
MKKAGFLFLAVMAIVVMSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVLKDINGPLQYLLMPTTHISGI
ESPLLLDFSTPNFFYLSWQARDFMSKKYGKPIPDSAISLTINSSKGRSQNHFHIHISCISLEARKQLDNNLKKINSRWSP
LSGGLNGHKYLARRVTESELAQKSPFIMLAKEAPNAHKRMGDYGLAVVQQSDNSFVLLATRFNPLTSNRASAEEIQDHEC
TILR
>Mature_244_residues
MKKAGFLFLAVMAIVVMSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVLKDINGPLQYLLMPTTHISGI
ESPLLLDFSTPNFFYLSWQARDFMSKKYGKPIPDSAISLTINSSKGRSQNHFHIHISCISLEARKQLDNNLKKINSRWSP
LSGGLNGHKYLARRVTESELAQKSPFIMLAKEAPNAHKRMGDYGLAVVQQSDNSFVLLATRFNPLTSNRASAEEIQDHEC
TILR

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=251, Percent_Identity=70.1195219123506, Blast_Score=372, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763
- InterPro:   IPR015993 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 27420; Mature: 27420

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAGFLFLAVMAIVVMSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEE
KDINGPLQYLLMPTTHISGIESPLLLDFSTPNFFYLSWQARDFMSKKYGKPIPDSAISLT
EECCCCEEEEEECCHHCCCCCCCEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCEEEEE
INSSKGRSQNHFHIHISCISLEARKQLDNNLKKINSRWSPLSGGLNGHKYLARRVTESEL
EECCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AQKSPFIMLAKEAPNAHKRMGDYGLAVVQQSDNSFVLLATRFNPLTSNRASAEEIQDHEC
HHCCCEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCE
TILR
EEEC
>Mature Secondary Structure
MKKAGFLFLAVMAIVVMSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVL
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEE
KDINGPLQYLLMPTTHISGIESPLLLDFSTPNFFYLSWQARDFMSKKYGKPIPDSAISLT
EECCCCEEEEEECCHHCCCCCCCEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCEEEEE
INSSKGRSQNHFHIHISCISLEARKQLDNNLKKINSRWSPLSGGLNGHKYLARRVTESEL
EECCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
AQKSPFIMLAKEAPNAHKRMGDYGLAVVQQSDNSFVLLATRFNPLTSNRASAEEIQDHEC
HHCCCEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCE
TILR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]