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The map label for this gene is comM [H]

Identifier: 108563202

GI number: 108563202

Start: 816988

End: 818508

Strand: Reverse

Name: comM [H]

Synonym: HPAG1_0777

Alternate gene names: 108563202

Gene position: 818508-816988 (Counterclockwise)

Preceding gene: 108563203

Following gene: 108563201

Centisome position: 51.27

GC content: 41.16

Gene sequence:

>1521_bases
ATGATTAACACGATATTTTGCGCGACTATGCAAAGGGGAGTGGCAGAAATCGTGGCCGTGGAAGCGACTTTCACAAGGGC
TTTGCCGGCGTTTGTGATTTCAGGCCTGGCTAATAATTCTATCCAAGAAGCCAAACAGCGGGTCCAATCGGCTTTACAAA
ATAACGATTTCACTTTCCCGCCTTTAAAAATCACCATCAACCTTTCCCCTTCAGATTTGCCTAAATCCGGGAGCCATTTT
GATTTGCCTATCGCTCTTTTAATCGCTTTGCAAAAACAAGAGTTGGCTTTTAAAGAGTGGTTTGCTTTTGGGGAGTTAGG
GCTTGATGGCAAGATCAAACCCAATCCTAACATTTTCCCCATGCTTTTAGACATTGCCATTAAACACCCCCATGCTAAAG
TCATTGCGCCTAAGGCTAATGAGGAGCTTTTTTCGCTCATCCCTAATTTGCAATGCTTTTTTGTGGGGAATTTTAAAGAA
GCTTTAGAAATCTTGCAAAACCCTGAAACCAAAGCAGACACCCACACGAAAAAACTACCCTTTAAAACGATAGAATTGAA
CGATAAAGAGTATTATTTTTCAGACGCCTATGCCTTAGATTTTAAAGAAGTTAAGGGGCAAGCTGTCGCCAAAGAGGCCG
CTTTGATCGCTAGCGCTGGGTTTCATAATTTGATTTTAGAGGGAAGTCCAGGGTGTGGGAAAAGCATGATTATTAATCGC
ATGCGTTATATCTTGCCTCCATTAAGCCTGAATGAAATCCTAGAAGCGACAAAATTACGCATTTTAAGCGAGCAAGACAG
CGCCTATTACCCTTTAAGGAGTTTTAGAAACCCTCACCAAAGCGCTTCAAAATCCAGCATTTTAGGCTCAAGCTCTCTAA
GAGAGCCAAAACCTGGCGAAATCGCGCTAGCGCATAACGGCATGCTTTTTTTTGATGAATTGCCTCATTTTAAAAAGGAT
ATTTTGGAAGCTTTGAGAGAGCCTTTAGAAAACAATAAATTAGTGATCTCACGAGTGCATAGCAAGATTGAATACGACAC
CTCTTTTTTATTTGTAGGGGCTCAAAACCCTTGTTTGTGCGGGAATTTACTCAGCGCCACCAAAGCATGCCGTTGCCAAG
ACAGAGAAATCATGCAGTATAAAAACCGCTTGAGCGAGCCTTTTTTAGACAGGATTGATTTGTTTGTGCAAATGGAAGAG
GGGAATTATAAGGACACGCCGTCGCATTCTTGGACTTCAAAAGAGATGCATGAATTAGTGTTATTAGCTTTCAAACAGCA
AAAGTTAAGGAAACAGAGCGCTTTTAATGGTAAGCTTAATGAAGAGCAGATCGAACGATTTTGCCCTTTAAACGCTGAAG
CAAAAAAGTTGTTAGAGCAGGCGGTTGAAAGGTTTAATCTTTCCATGCGCTCTGTTAATAAGGTCAAAAAAGTCGCTAGG
ACGATTGCGGATTTAAACGCTTGCGAGAATATAGAAAAATCTCATGTGCTTAAAGCGCTGAGTTTTAGAAAGATTTCTTA
A

Upstream 100 bases:

>100_bases
ATGGCGTGTTATTCGTGGATAAATTATCCATTTTGAAGCGTAAGAAATTTGAAAAAGAACTCAAAGAGCTGCAAAAACAA
CAAAAACACAAGTAACCACC

Downstream 100 bases:

>100_bases
AAGGATTTTTATAAGGGAGAGAAAATGCAAGAATACCACATTCACAATTTGGATTGCCCTGATTGCGCGTCTAAATTAGA
AAGGGATTTAAACAAATTAG

Product: DNA transformation competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELAFKEWFAFGELGLDGKIKPNPNIFPMLLDIAIKHPHAKVIAPKANEELFSLIPNLQCFFVGNFKE
ALEILQNPETKADTHTKKLPFKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
MRYILPPLSLNEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYDTSFLFVGAQNPCLCGNLLSATKACRCQDREIMQYKNRLSEPFLDRIDLFVQMEE
GNYKDTPSHSWTSKEMHELVLLAFKQQKLRKQSAFNGKLNEEQIERFCPLNAEAKKLLEQAVERFNLSMRSVNKVKKVAR
TIADLNACENIEKSHVLKALSFRKIS

Sequences:

>Translated_506_residues
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELAFKEWFAFGELGLDGKIKPNPNIFPMLLDIAIKHPHAKVIAPKANEELFSLIPNLQCFFVGNFKE
ALEILQNPETKADTHTKKLPFKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
MRYILPPLSLNEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYDTSFLFVGAQNPCLCGNLLSATKACRCQDREIMQYKNRLSEPFLDRIDLFVQMEE
GNYKDTPSHSWTSKEMHELVLLAFKQQKLRKQSAFNGKLNEEQIERFCPLNAEAKKLLEQAVERFNLSMRSVNKVKKVAR
TIADLNACENIEKSHVLKALSFRKIS
>Mature_506_residues
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLIALQKQELAFKEWFAFGELGLDGKIKPNPNIFPMLLDIAIKHPHAKVIAPKANEELFSLIPNLQCFFVGNFKE
ALEILQNPETKADTHTKKLPFKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
MRYILPPLSLNEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYDTSFLFVGAQNPCLCGNLLSATKACRCQDREIMQYKNRLSEPFLDRIDLFVQMEE
GNYKDTPSHSWTSKEMHELVLLAFKQQKLRKQSAFNGKLNEEQIERFCPLNAEAKKLLEQAVERFNLSMRSVNKVKKVAR
TIADLNACENIEKSHVLKALSFRKIS

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=496, Percent_Identity=35.8870967741936, Blast_Score=290, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 57055; Mature: 57055

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00676 SIGMA54_INTERACT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFP
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PLKITINLSPSDLPKSGSHFDLPIALLIALQKQELAFKEWFAFGELGLDGKIKPNPNIFP
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
MLLDIAIKHPHAKVIAPKANEELFSLIPNLQCFFVGNFKEALEILQNPETKADTHTKKLP
HHHHHHHCCCCCEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHCCC
FKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
EEEEEECCCEEEECCEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
MRYILPPLSLNEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGE
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCC
IALAHNGMLFFDELPHFKKDILEALREPLENNKLVISRVHSKIEYDTSFLFVGAQNPCLC
EEEEECCEEEEHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHEECCEEEEEECCCCCCH
GNLLSATKACRCQDREIMQYKNRLSEPFLDRIDLFVQMEEGNYKDTPSHSWTSKEMHELV
HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHH
LLAFKQQKLRKQSAFNGKLNEEQIERFCPLNAEAKKLLEQAVERFNLSMRSVNKVKKVAR
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TIADLNACENIEKSHVLKALSFRKIS
HHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANNSIQEAKQRVQSALQNNDFTFP
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PLKITINLSPSDLPKSGSHFDLPIALLIALQKQELAFKEWFAFGELGLDGKIKPNPNIFP
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
MLLDIAIKHPHAKVIAPKANEELFSLIPNLQCFFVGNFKEALEILQNPETKADTHTKKLP
HHHHHHHCCCCCEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHCCC
FKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
EEEEEECCCEEEECCEEEECHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
MRYILPPLSLNEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGE
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCC
IALAHNGMLFFDELPHFKKDILEALREPLENNKLVISRVHSKIEYDTSFLFVGAQNPCLC
EEEEECCEEEEHHCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHEECCEEEEEECCCCCCH
GNLLSATKACRCQDREIMQYKNRLSEPFLDRIDLFVQMEEGNYKDTPSHSWTSKEMHELV
HHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHH
LLAFKQQKLRKQSAFNGKLNEEQIERFCPLNAEAKKLLEQAVERFNLSMRSVNKVKKVAR
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TIADLNACENIEKSHVLKALSFRKIS
HHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]