| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563181
Identifier: 108563181
GI number: 108563181
Start: 791274
End: 792011
Strand: Reverse
Name: 108563181
Synonym: HPAG1_0756
Alternate gene names: NA
Gene position: 792011-791274 (Counterclockwise)
Preceding gene: 108563182
Following gene: 108563178
Centisome position: 49.61
GC content: 35.23
Gene sequence:
>738_bases ATGAATTTTTATCAAAAAATATACACGCATAAAGTCGTTTTTTCTTCATTGTTTTTTTTGTTGTTTTTGTTCAATGCGGA AACTTTGTTGTTTTCGCATTTCAGCGATGATTTTTCGCAATTGTTTTTTTTGTTTGAAAACCATGTTTATGATTTCATTG TCAAATTAGATTACTTGGGGTTAATAGGCGTTTCTTTAATTTATCTGCTTGTGCTTATTCTAAAGCCTTTCACCCTCACG CGCCAAAAATGCGCTTGCGTAGGGATATTATGCCTTTCTTTCTACGCTTGGAATTTTCCTGTTAAACATTCTTTAGTAAC GCTTTATCTTTTCTACTTTGCGCTGTTAGCGACTTTATTGTGGCGTTTTTTAGGGGCTAGCATGAAGCAATCTTTCTTGC CGTCTATGAATATTTGCATCGTGTGGGTTTTTGCTTCTTCTTTACAGAGTTTTAGGTTTTTAAGTGTGTCTGATTGCGTG GATTTTTCCCTTTTTACACTCGCTCTTATTTTATTGATACTGGTTTTAATCTATCACAAACGCCTTTTTGGGTTGTATGA ATACGCTAACACGCTTATTTTGATCGTGGGGCTTAGCGTGGTGGTGCTATGCTCTAGCATGTTCATTCAAACTAAAGAAT ATTATGGCATGCGGTTGGGTTTTTATTTTTTAGGCTTGTTAGGGTGGCTTTTAGAATATGTGCATAACACTTTAAGGCGT TTGGAACATCAAATTTAA
Upstream 100 bases:
>100_bases CATCCAAAGCAAACCGTATCAAAAGATCTTGGCTAAGGGCATTGCTGATGGCATTGATAGTTTCTTCAGCAAGAATGATT AGGCAATGATTAGGTTGTAG
Downstream 100 bases:
>100_bases AGCTCAAGTAGGGATAGCTAAAGCCTTTTGATTGGGTGTCCTTGATTGAGTGTCTTTTTAGGGCTTAAAAGCGGGTTTAA ACAATCTTAAAGAGGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNFYQKIYTHKVVFSSLFFLLFLFNAETLLFSHFSDDFSQLFFLFENHVYDFIVKLDYLGLIGVSLIYLLVLILKPFTLT RQKCACVGILCLSFYAWNFPVKHSLVTLYLFYFALLATLLWRFLGASMKQSFLPSMNICIVWVFASSLQSFRFLSVSDCV DFSLFTLALILLILVLIYHKRLFGLYEYANTLILIVGLSVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR LEHQI
Sequences:
>Translated_245_residues MNFYQKIYTHKVVFSSLFFLLFLFNAETLLFSHFSDDFSQLFFLFENHVYDFIVKLDYLGLIGVSLIYLLVLILKPFTLT RQKCACVGILCLSFYAWNFPVKHSLVTLYLFYFALLATLLWRFLGASMKQSFLPSMNICIVWVFASSLQSFRFLSVSDCV DFSLFTLALILLILVLIYHKRLFGLYEYANTLILIVGLSVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR LEHQI >Mature_245_residues MNFYQKIYTHKVVFSSLFFLLFLFNAETLLFSHFSDDFSQLFFLFENHVYDFIVKLDYLGLIGVSLIYLLVLILKPFTLT RQKCACVGILCLSFYAWNFPVKHSLVTLYLFYFALLATLLWRFLGASMKQSFLPSMNICIVWVFASSLQSFRFLSVSDCV DFSLFTLALILLILVLIYHKRLFGLYEYANTLILIVGLSVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR LEHQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28728; Mature: 28728
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFYQKIYTHKVVFSSLFFLLFLFNAETLLFSHFSDDFSQLFFLFENHVYDFIVKLDYLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGVSLIYLLVLILKPFTLTRQKCACVGILCLSFYAWNFPVKHSLVTLYLFYFALLATLL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WRFLGASMKQSFLPSMNICIVWVFASSLQSFRFLSVSDCVDFSLFTLALILLILVLIYHK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLFGLYEYANTLILIVGLSVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHQI HHHCC >Mature Secondary Structure MNFYQKIYTHKVVFSSLFFLLFLFNAETLLFSHFSDDFSQLFFLFENHVYDFIVKLDYLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGVSLIYLLVLILKPFTLTRQKCACVGILCLSFYAWNFPVKHSLVTLYLFYFALLATLL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WRFLGASMKQSFLPSMNICIVWVFASSLQSFRFLSVSDCVDFSLFTLALILLILVLIYHK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLFGLYEYANTLILIVGLSVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEHQI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA