| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563159
Identifier: 108563159
GI number: 108563159
Start: 771611
End: 772417
Strand: Direct
Name: 108563159
Synonym: HPAG1_0734
Alternate gene names: NA
Gene position: 771611-772417 (Clockwise)
Preceding gene: 108563158
Following gene: 108563160
Centisome position: 48.34
GC content: 34.57
Gene sequence:
>807_bases ATGAATACTCTTAAAAAGCATTTAGCCTTTATCATTCCCCTAGTAGCGTTATTGTTTAGCTTGGAGTGCGTGTTATTTAT CAATCAAGCGATAGAACAAAAAGAAAAAAAATTGATTGAAGATTATTCGGTCGTGTTGGCCAGCACGCAAAAATTAAGCT TGGAATTGTTGCGTCAAAATTTTAGCGAAATCATAGCGTTAAAAGAAATTGATCCTAATTATTCTTTAGAGCCTCTTCAA AAAACTTTAGGCATAGACGGGCTTAAGGAATTAAGAAAAAATTTACCCTTTTTTTATTCTTTACAACTTTCCACATTCCC CACTCAAGAGCGTTTAGAAAACATTAAAGAAAAATTGCTCAAAATCCCTGGCGTTCAAAAAGTTGAAGTCTTTGCCAAAA CTTACATGCAAGTGTATGATCTCTTGAGTTTTATTAAAACAGCGGTCTATATCTTTGCGTTAGTGGTCTTTGTCTTATCG GTTTTATTGATGTTTAAACAAGTCCGCATCTGGATCTATCAATACCATGAGAGGTTAGAAATCATGGATTTATTAGGGGC TTCGGTGTCTTTTAAAAACAGGTTTTTGTATAAAATAGCTTTAATGGATTCTTTAATCGCTAGTTTTTTAGCCCCCATGC TCATGCTCTATACCACTTCGCAAAAAGGTTTTGAAAAAACGATGGATACTTTGGGTATTATAGGAGGCGCGTTTGTTTTA AACCATTTTTTATGGGGACTGCTTTTTAGCCTTGTGGTCTCATTTGTTTCTGTTTTACTTGTAGCTTGGAGGACTAGACA TGTATAA
Upstream 100 bases:
>100_bases AACACGCAATTAAACGCTACGATCGTAGTGGTTACGCACAAATTCCCTAAAAATTTTAGCGCTTATCACCGAAAATTTTA TATAGAAGATGGGGAAGTTT
Downstream 100 bases:
>100_bases ATTAGGGGTGTTTTTGTTAGCCACCTTACTATCTGCTAACACGCAAAAAGTAAGCGATATTGCTAAAGATATCCAGCATA AAGAAACCCTTTTGAAAAAA
Product: cell division membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQNFSEIIALKEIDPNYSLEPLQ KTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLS VLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL NHFLWGLLFSLVVSFVSVLLVAWRTRHV
Sequences:
>Translated_268_residues MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQNFSEIIALKEIDPNYSLEPLQ KTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLS VLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL NHFLWGLLFSLVVSFVSVLLVAWRTRHV >Mature_268_residues MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQNFSEIIALKEIDPNYSLEPLQ KTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLS VLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL NHFLWGLLFSLVVSFVSVLLVAWRTRHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30962; Mature: 30962
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSEIIALKEIDPNYSLEPLQKTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLL HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH KIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLSVLLMFKQVRIWIYQYHERLE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NHFLWGLLFSLVVSFVSVLLVAWRTRHV HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLSLELLRQN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSEIIALKEIDPNYSLEPLQKTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLL HHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH KIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLSVLLMFKQVRIWIYQYHERLE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMDLLGASVSFKNRFLYKIALMDSLIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NHFLWGLLFSLVVSFVSVLLVAWRTRHV HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA