Click here to switch to the map view.

The map label for this gene is 108563030

Identifier: 108563030

GI number: 108563030

Start: 632451

End: 632816

Strand: Reverse

Name: 108563030

Synonym: HPAG1_0605

Alternate gene names: NA

Gene position: 632816-632451 (Counterclockwise)

Preceding gene: 108563031

Following gene: 108563029

Centisome position: 39.64

GC content: 36.89

Gene sequence:

>366_bases
ATGGGTGCAGCGGTTGTTTTATTTTTAACGCTGATTTTATTGTTTTTAGTTTTAAGGGATTTTGGTTTAGTTAGCCCCAA
ACAAAAGATTTTAGCTTTTTTAATTGTAGGGATTATAGGAGCGAGCATCAGCGTTTATACTTACCAACAAAACCAACAAA
ACCAGCAAGAAATCGCTTTGCAAAGAGCGTTTTTAAGGGGGGAAACCTTGTTGTGTAAAGGCATTAAAGTGAATAACCAA
ACCTTTAATTTAGTGAGCGGGACTTTGAGCTTTTTAGGCAAAAAACAAACCCCTATGAAAGACGTTCTTGTGGATTTGGA
TTCTTGTCAGACGCTTCAAAAAGATCCCTTAATCCAACCCCAATGA

Upstream 100 bases:

>100_bases
AGCTGTTAGTCAATGATAATGTGGTAGAAACGATTGAAAAAGGCTTTGTGATAGGTTTTGGAGCGGGGGATATTACCTAT
CAATTGAGAGGCGAAATGTA

Downstream 100 bases:

>100_bases
ACCCCCCAATGATAAATAATAATAATAATAACACCCCACCCAAACCCCTAGAAGAAAGTCTGGATTTAAAAGAGTTTATC
GCTCTTTTTAAAACTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MGAAVVLFLTLILLFLVLRDFGLVSPKQKILAFLIVGIIGASISVYTYQQNQQNQQEIALQRAFLRGETLLCKGIKVNNQ
TFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQPQ

Sequences:

>Translated_121_residues
MGAAVVLFLTLILLFLVLRDFGLVSPKQKILAFLIVGIIGASISVYTYQQNQQNQQEIALQRAFLRGETLLCKGIKVNNQ
TFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQPQ
>Mature_120_residues
GAAVVLFLTLILLFLVLRDFGLVSPKQKILAFLIVGIIGASISVYTYQQNQQNQQEIALQRAFLRGETLLCKGIKVNNQT
FNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13423; Mature: 13292

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAAVVLFLTLILLFLVLRDFGLVSPKQKILAFLIVGIIGASISVYTYQQNQQNQQEIAL
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH
QRAFLRGETLLCKGIKVNNQTFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP
HHHHHCCCEEEECCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCC
Q
C
>Mature Secondary Structure 
GAAVVLFLTLILLFLVLRDFGLVSPKQKILAFLIVGIIGASISVYTYQQNQQNQQEIAL
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH
QRAFLRGETLLCKGIKVNNQTFNLVSGTLSFLGKKQTPMKDVLVDLDSCQTLQKDPLIQP
HHHHHCCCEEEECCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA