Click here to switch to the map view.

The map label for this gene is 108562918

Identifier: 108562918

GI number: 108562918

Start: 511846

End: 512700

Strand: Reverse

Name: 108562918

Synonym: HPAG1_0493

Alternate gene names: NA

Gene position: 512700-511846 (Counterclockwise)

Preceding gene: 108562924

Following gene: 108562911

Centisome position: 32.12

GC content: 35.79

Gene sequence:

>855_bases
ATGTTTAAAGATTTTTATCGCACCACCCTCTCTTTTTTAAAGCCTTTATTGCTTTTATTGGGTTTATTGTTGCCGTTTTC
GCTTTGTATAGCTGATGAATATATTAGCATAAGTGATGATTGGGATGAAAGGGCACGAAATCAATGGGATGAAATTGCGC
GAAATCATAAGACATATTATTTTGAAAATGGTTTAGACCATTTTAATCAAGGCCAATACAAACAAGCCTTTAAAGATTTT
AAATTGGCGCAAGAATACAGCATCGGGATTGGCAGCGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGT
GGATTACAAAAAAGCGCAATTCTATGCACAAAACGCTATCAAAGGGTATGGGAGCGGATTTTTAGGGGGTGCTTTAATTT
TAGGATACATGCAAGCAGAAGGCTTAGGGATGAAAAAGGATTTGAAACAAGCGCTTAAGACTTACAGGCATGTGATTCGC
ATATTTTCTAATAAAAGCACAAATTATTTTGCTAACAATTTTAGATTACCAAACCTTGCGTTCACTAGTATGCTTATTGG
ATCGCGATTCATTGATCTTTCAGGTTTGAGCGCGAATCCTATAAAATTTGGAAAGAAGTTTGGAATACTTGTTATGAAAT
CCACTCAAATCAAAGATAAGACACTTCTTTGGGAAGATATTGCTGAAATTTCAAGCAATATTACTTTACTCAAACAACAA
ATGGGGGAAATCCTTTACAGAATTGGGATCGCTTATAAAGAAGGGCTTGGCACCAGAAAACAAAAAAGTAGGGCTAAAAA
ATTCTTGCAAAAATCCGCAGAATTTGGCTATGAAAAAGCCATGGAAGCTCTGTAA

Upstream 100 bases:

>100_bases
ATTCTTCAACTGCTATCCATTCAAATTGCTTTGAAAGTTCGCTTGTGATCTGGCTAGAAAGACAAGCTAAAGAATGGCTC
AAATTGTAAAAGGATCTGAC

Downstream 100 bases:

>100_bases
TTTGTAATCAAACTTTGTATTAAGCTTGATTGAATGGGTTAAAAAATCCGTTTAGACCACCCTCATTAAAGCAAAGCCCT
ATTTTTCCATTATAATAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFKDFYRTTLSFLKPLLLLLGLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYKQAFKDF
KLAQEYSIGIGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGFLGGALILGYMQAEGLGMKKDLKQALKTYRHVIR
IFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ
MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL

Sequences:

>Translated_284_residues
MFKDFYRTTLSFLKPLLLLLGLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYKQAFKDF
KLAQEYSIGIGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGFLGGALILGYMQAEGLGMKKDLKQALKTYRHVIR
IFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ
MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL
>Mature_284_residues
MFKDFYRTTLSFLKPLLLLLGLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYKQAFKDF
KLAQEYSIGIGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGFLGGALILGYMQAEGLGMKKDLKQALKTYRHVIR
IFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ
MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32531; Mature: 32531

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKDFYRTTLSFLKPLLLLLGLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE
FENGLDHFNQGQYKQAFKDFKLAQEYSIGIGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
KGYGSGFLGGALILGYMQAEGLGMKKDLKQALKTYRHVIRIFSNKSTNYFANNFRLPNLA
HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHH
FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ
HHHHHHHHHHEECCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MFKDFYRTTLSFLKPLLLLLGLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE
FENGLDHFNQGQYKQAFKDFKLAQEYSIGIGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHH
KGYGSGFLGGALILGYMQAEGLGMKKDLKQALKTYRHVIRIFSNKSTNYFANNFRLPNLA
HHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHH
FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ
HHHHHHHHHHEECCCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA