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The map label for this gene is hspR [H]

Identifier: 108562847

GI number: 108562847

Start: 430491

End: 430862

Strand: Reverse

Name: hspR [H]

Synonym: HPAG1_0422

Alternate gene names: 108562847

Gene position: 430862-430491 (Counterclockwise)

Preceding gene: 108562848

Following gene: 108562846

Centisome position: 26.99

GC content: 38.98

Gene sequence:

>372_bases
GTGTGCGATTATGATGAACCGCTTTATTTGATCAGCGTCGTGGCTAAAATCTTAGGCGTGCACCCTCAAACCTTGCGCCA
ATACGAAAAAGAGGGTTTGATAGAGCCTAGCAGGACTGATGGGAAAATGCGCTTGTATTCCAAACGAGACATGGACAAAA
TCAAAACGATTTTACGCCTTACAAGGGATATGGGGGTTAATCTAGCGGGCGTGGATATTATCTTGCGTTTAAAAGAAAAG
CTTGATGAATTAGACAATCTCAATAAAGAATTGCAAGACGCTCTGCAAAAACACTCTAAAAACACCAAAACCCCAACGAA
AAATTTAAACACCCCTACGAATTTTTACGAATTGATTTTATTTAAAAAATGA

Upstream 100 bases:

>100_bases
GGGGGATTTGTATTTGCAAGCTCGTTTGATCTTGCCTAAAACGGAGACGCTTTCTAATGAGTTAAAAGCGTTATTAGAAA
AAGAATTGTAAGGAGGAATC

Downstream 100 bases:

>100_bases
GCCTGACTTCGCTTTTAAACCCAAAAAGCCTAGAAGATTTTTTAGGCCAAGAGCATTTAATAGGGAAAGACGCCCCCTTA
TTTAAAGCCTTACAATCCAA

Product: putative heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSKRDMDKIKTILRLTRDMGVNLAGVDIILRLKEK
LDELDNLNKELQDALQKHSKNTKTPTKNLNTPTNFYELILFKK

Sequences:

>Translated_123_residues
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSKRDMDKIKTILRLTRDMGVNLAGVDIILRLKEK
LDELDNLNKELQDALQKHSKNTKTPTKNLNTPTNFYELILFKK
>Mature_123_residues
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSKRDMDKIKTILRLTRDMGVNLAGVDIILRLKEK
LDELDNLNKELQDALQKHSKNTKTPTKNLNTPTNFYELILFKK

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 14335; Mature: 14335

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSKRDMDKIKTILRL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHCCHHHHHHHHHH
TRDMGVNLAGVDIILRLKEKLDELDNLNKELQDALQKHSKNTKTPTKNLNTPTNFYELIL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHE
FKK
ECC
>Mature Secondary Structure
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSKRDMDKIKTILRL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHCCHHHHHHHHHH
TRDMGVNLAGVDIILRLKEKLDELDNLNKELQDALQKHSKNTKTPTKNLNTPTNFYELIL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHE
FKK
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]