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The map label for this gene is copP [H]

Identifier: 108562799

GI number: 108562799

Start: 386503

End: 386703

Strand: Reverse

Name: copP [H]

Synonym: HPAG1_0374

Alternate gene names: 108562799

Gene position: 386703-386503 (Counterclockwise)

Preceding gene: 108562800

Following gene: 108562798

Centisome position: 24.22

GC content: 40.3

Gene sequence:

>201_bases
ATGAAAGCAACTTTTCAAGTGCCAAGCATTACTTGCAACCATTGCGTGGATAAAATTGAAAAATTTGTGGGTGAAATTGA
AGGCGTGAGCTTTATTGATGTGAGCGTGGAAAAAAAGAGCGTGGTTGTGGAATTTGACGCTCCAGCGACACAGGATTTGA
TCAAGGAAGCTTTATTAGATGCGGGGCAAGAAGTAATATAA

Upstream 100 bases:

>100_bases
GTTAAGCCCGGCGATTGCGGGTTTAGCGATGAGTTTAAGCTCTGTGAGTGTGGTCTTAAACTCCCAAAGGCTAAGGAATT
TTAAAATTAAGGATCATTGA

Downstream 100 bases:

>100_bases
TAAAGGTAGTGCGATATAGAAGTAGTGGGTTAAAAACCGCAACATTCAAAAGGGTTGTAATCTTTTAATACTTTGTTTGG
GTTTTTTAACGCCCTTCAAT

Product: copper ion binding protein

Products: NA

Alternate protein names: Copper ion-binding protein [H]

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVI

Sequences:

>Translated_66_residues
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVI
>Mature_66_residues
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEVI

Specific function: Part of a cation-transporting system which is associated with copper export out of the H.pylori cells [H]

COG id: COG2608

COG function: function code P; Copper chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HMA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000428
- InterPro:   IPR006122
- InterPro:   IPR017969
- InterPro:   IPR006121 [H]

Pfam domain/function: PF00403 HMA [H]

EC number: NA

Molecular weight: Translated: 7210; Mature: 7210

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
AGQEVI
CCCCCC
>Mature Secondary Structure
MKATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHH
AGQEVI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]