| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is kgtP [H]
Identifier: 108562781
GI number: 108562781
Start: 364832
End: 366112
Strand: Reverse
Name: kgtP [H]
Synonym: HPAG1_0356
Alternate gene names: 108562781
Gene position: 366112-364832 (Counterclockwise)
Preceding gene: 108562782
Following gene: 108562780
Centisome position: 22.93
GC content: 40.05
Gene sequence:
>1281_bases ATGAACCCCCAACCCGCCACCAAAAAACCCTTAAAATCCCTTTTAGCCGCTAGTTCAGGTAATTTAGTGGAATGGTATGA CTTTTACGCTTATGCGTTCCTCGCTCCTTATTTTGCTAAGGAATTTACCCACACCAATGACCCTACTTTAGCGCTAATCT CAGCTTTTTTGGTTTTTATGCTAGGGTTTTTCATGCGCCCTTTGGGGAGTTTGTTTTTTGGTAAATTGGGGGATAAAAAG GGGCGTAAAACTTCCATGGTGTATTCCATTATCCTTATGGCGCTAGGCTCTTTTTTGCTCGCATTGCTCCCCACTAAAGA AATCGTAGGAGAATGGGCGTTCTTGTTTTTATTATTAGCAAGGCTTTTACAAGGCTTTAGCGTGGGAGGAGAATATGGCG TGGTCGCTACTTACCTCTCTGAATTAGGCAAGAATGGCAAAAAAGGTTTTTATGGCTCTTTTCAATATGTAACTTTAGTT GGAGGGCAACTCTTAGCCATTTTTTCGCTCTTTATCGTTGAAAATATTTACACGCATGAACAAATCAGCGCGTTCGCTTG GCGTTATTTATTCGCTTTAGGGGGTATATTAGCCCTACTCTCGCTCTTTTTAAGAAATATCATGGAAGAAACCATGGATA GCAAAACAACTTCCAAAACCACTATTAAAGAAGAAACCCAAAGAGGCAGTTTAAAGGAATTGCTCCACCATAAAAAAGCC TTAATGATAGTTTTTGGACTCACTATTGGAGGGAGTTTGTGTTTTTATACTTTTACGGTATATTTAAAAATCTTTTTAAC CAACAGCTCATCATTCAGCCCTAAAGAAAGCAGTTTTATCATGCTTTTATCGCTCACTTATTTCATCTTCTTACAGCCCT TATGCGGGATGCTTGCGGATAAAATCAAACGCACCCAAATGTTGATGGTTTTTGCTATCACAGGGCTTATTGTAACGCCT GTTGTCTTTTATGGTATCAAGCATGCCACTAGCGTGTATGAAGCCCTATTTTATGAAATACTCGCATTGAGCAGCATGAG TTTTTACACTTGCATTGCTGGGGTCATTAAAGCGGAATTGTTCCCTGAACATGTGCGAGCACTTGGCGTGGGTTTAGCCT ATGCGATTGCGAATGCGCTTTTTGGAGGGAGCGCGAGTTATGTAGCGTTAGAGTTCAAACAACATGGTTTTGAATGGGGG TTTGTGGGCTATGTCATGTTTAGTATTGTTATCTTTATGGTTATGGTTATCATATTCCCTAAAAAAACCTATTTGGAATG A
Upstream 100 bases:
>100_bases ATACAAACGACACCAACCTTTCATCTATTAATCAAATATTATCTGTGGTTTCCCTAACTCCTAGTAAAATTACCTAAAAA TTTCATATTCAAGGATAGCC
Downstream 100 bases:
>100_bases ATCTGTTTTTATTATAATTTTTGCTATAATTTTTCCTTTTAAAAGGATTCTTGCATGCAAAATGGGTATTATGCAGCCAC GGGAGCTATGGCTACACAAT
Product: alpha-ketoglutarate permease
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MNPQPATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKEFTHTNDPTLALISAFLVFMLGFFMRPLGSLFFGKLGDKK GRKTSMVYSIILMALGSFLLALLPTKEIVGEWAFLFLLLARLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLV GGQLLAIFSLFIVENIYTHEQISAFAWRYLFALGGILALLSLFLRNIMEETMDSKTTSKTTIKEETQRGSLKELLHHKKA LMIVFGLTIGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLSLTYFIFLQPLCGMLADKIKRTQMLMVFAITGLIVTP VVFYGIKHATSVYEALFYEILALSSMSFYTCIAGVIKAELFPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEWG FVGYVMFSIVIFMVMVIIFPKKTYLE
Sequences:
>Translated_426_residues MNPQPATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKEFTHTNDPTLALISAFLVFMLGFFMRPLGSLFFGKLGDKK GRKTSMVYSIILMALGSFLLALLPTKEIVGEWAFLFLLLARLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLV GGQLLAIFSLFIVENIYTHEQISAFAWRYLFALGGILALLSLFLRNIMEETMDSKTTSKTTIKEETQRGSLKELLHHKKA LMIVFGLTIGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLSLTYFIFLQPLCGMLADKIKRTQMLMVFAITGLIVTP VVFYGIKHATSVYEALFYEILALSSMSFYTCIAGVIKAELFPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEWG FVGYVMFSIVIFMVMVIIFPKKTYLE >Mature_426_residues MNPQPATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKEFTHTNDPTLALISAFLVFMLGFFMRPLGSLFFGKLGDKK GRKTSMVYSIILMALGSFLLALLPTKEIVGEWAFLFLLLARLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLV GGQLLAIFSLFIVENIYTHEQISAFAWRYLFALGGILALLSLFLRNIMEETMDSKTTSKTTIKEETQRGSLKELLHHKKA LMIVFGLTIGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLSLTYFIFLQPLCGMLADKIKRTQMLMVFAITGLIVTP VVFYGIKHATSVYEALFYEILALSSMSFYTCIAGVIKAELFPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEWG FVGYVMFSIVIFMVMVIIFPKKTYLE
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=416, Percent_Identity=45.4326923076923, Blast_Score=343, Evalue=1e-95, Organism=Escherichia coli, GI1790550, Length=376, Percent_Identity=28.7234042553192, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1788292, Length=385, Percent_Identity=28.3116883116883, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1789941, Length=399, Percent_Identity=29.0726817042606, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI87082404, Length=432, Percent_Identity=25, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87082231, Length=214, Percent_Identity=28.9719626168224, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47575; Mature: 47575
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQPATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKEFTHTNDPTLALISAFLVFM CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LGFFMRPLGSLFFGKLGDKKGRKTSMVYSIILMALGSFLLALLPTKEIVGEWAFLFLLLA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH RLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLVGGQLLAIFSLFIVENIYTHE HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QISAFAWRYLFALGGILALLSLFLRNIMEETMDSKTTSKTTIKEETQRGSLKELLHHKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH LMIVFGLTIGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLSLTYFIFLQPLCGMLAD HHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KIKRTQMLMVFAITGLIVTPVVFYGIKHATSVYEALFYEILALSSMSFYTCIAGVIKAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH FPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEWGFVGYVMFSIVIFMVMVIIFP HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCC KKTYLE CHHHCC >Mature Secondary Structure MNPQPATKKPLKSLLAASSGNLVEWYDFYAYAFLAPYFAKEFTHTNDPTLALISAFLVFM CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LGFFMRPLGSLFFGKLGDKKGRKTSMVYSIILMALGSFLLALLPTKEIVGEWAFLFLLLA HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH RLLQGFSVGGEYGVVATYLSELGKNGKKGFYGSFQYVTLVGGQLLAIFSLFIVENIYTHE HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QISAFAWRYLFALGGILALLSLFLRNIMEETMDSKTTSKTTIKEETQRGSLKELLHHKKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHH LMIVFGLTIGGSLCFYTFTVYLKIFLTNSSSFSPKESSFIMLLSLTYFIFLQPLCGMLAD HHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KIKRTQMLMVFAITGLIVTPVVFYGIKHATSVYEALFYEILALSSMSFYTCIAGVIKAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH FPEHVRALGVGLAYAIANALFGGSASYVALEFKQHGFEWGFVGYVMFSIVIFMVMVIIFP HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCC KKTYLE CHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]