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The map label for this gene is 108562752

Identifier: 108562752

GI number: 108562752

Start: 339353

End: 340117

Strand: Reverse

Name: 108562752

Synonym: HPAG1_0327

Alternate gene names: NA

Gene position: 340117-339353 (Counterclockwise)

Preceding gene: 108562757

Following gene: 108562750

Centisome position: 21.31

GC content: 40.13

Gene sequence:

>765_bases
ATGAAACTTAACTTGCAGGAGATACAATTGAGAACCTTGTTAAAAATGTTAGTTGGTGCAAGCTTGCTGACACACGCCTT
AGTAGCTAAAGAAGAAAGCGCAGCGCCTTCTTGGACAAAAAATTTGTATATGGGAGTCAATTACCAAACAGGTTCTATCA
ATTTAATGACTAATATCCATGAAGTTAGAGAAGTTACTAACTATCAAACCGGTTACACCAATATCATAACTAGCGTTAAT
AGCGTTAGAAAACTCACCAACATGGGATCTAATGGGATTGGATTAGTCATGGGCTATAACCACTTTTTCCATCCGGATAA
AATCTTGGGCTTGCGCTATTTTGCTTTTTTAGATTGGCAAGGCTATGGCATGAGATACCCTAAAGGCTATTATGGCGGCA
ACAACATGATCACTTATGGCGTGGGCGTGGATGCGGTGTGGAATTTCTTCCAAGGGAGTTTCTATCAAGATGATATTAGC
GTGGATATTGGCGTTTTTGGGGGGATTGCGATTGCGGGGAATAGCTGGTATATTGGCAGTAAAGGGCAAGAATTGTTAGG
CATCACTAACAGCAGGGCGGTTGATAACACCTCTTTTCAATTCCTCTTTAACTTTGGCCTCAAGGCTTTATTTGTAGATG
AACATGAATTTGAAATCGGTTTTAAATTCCCCACCATTAATAACAAATACTACACCACTGATGCGCTCAAGGTTCAAATG
CGTAGGGTCTTTGCCTTTTATGTGGGGTATAATTACCACTTCTAA

Upstream 100 bases:

>100_bases
ACTAGCCTTACTTGAGTTATTTTAAGCCTTGAATTATACTCTCTTATAAAGAATAAATGCTTAATTTTGAGTAAGTTGTT
GTAAAATTTAGATCTTTATA

Downstream 100 bases:

>100_bases
AAGGGCTTTTAAAACCCAACGCAACTCCCTAACATCTTTTGATAGTAACTCTTGGCTTTGAGGATCGTCTCTGTGTCATC
GGTTTTTAAAAGCACTTCGT

Product: outer membrane protein HorC

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLNLQEIQLRTLLKMLVGASLLTHALVAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREVTNYQTGYTNIITSVN
SVRKLTNMGSNGIGLVMGYNHFFHPDKILGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDIS
VDIGVFGGIAIAGNSWYIGSKGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQM
RRVFAFYVGYNYHF

Sequences:

>Translated_254_residues
MKLNLQEIQLRTLLKMLVGASLLTHALVAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREVTNYQTGYTNIITSVN
SVRKLTNMGSNGIGLVMGYNHFFHPDKILGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDIS
VDIGVFGGIAIAGNSWYIGSKGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQM
RRVFAFYVGYNYHF
>Mature_254_residues
MKLNLQEIQLRTLLKMLVGASLLTHALVAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREVTNYQTGYTNIITSVN
SVRKLTNMGSNGIGLVMGYNHFFHPDKILGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDIS
VDIGVFGGIAIAGNSWYIGSKGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQM
RRVFAFYVGYNYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28850; Mature: 28850

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNLQEIQLRTLLKMLVGASLLTHALVAKEESAAPSWTKNLYMGVNYQTGSINLMTNIH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEECHH
EVREVTNYQTGYTNIITSVNSVRKLTNMGSNGIGLVMGYNHFFHPDKILGLRYFAFLDWQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHEEEEEEEEEC
GYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDISVDIGVFGGIAIAGNSWYIGS
CCCCCCCCCEECCCCEEEEECCHHHHHHHHCCCEECCCCEEEEEEECCEEEECCEEEECC
KGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQM
CCCEEEEECCCCCCCCCHHEEEEECCCEEEEEECCEEEEEEECCCCCCCEEEHHHHHHHH
RRVFAFYVGYNYHF
HHHEEEEEEEEECC
>Mature Secondary Structure
MKLNLQEIQLRTLLKMLVGASLLTHALVAKEESAAPSWTKNLYMGVNYQTGSINLMTNIH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEECHH
EVREVTNYQTGYTNIITSVNSVRKLTNMGSNGIGLVMGYNHFFHPDKILGLRYFAFLDWQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHEEEEEEEEEC
GYGMRYPKGYYGGNNMITYGVGVDAVWNFFQGSFYQDDISVDIGVFGGIAIAGNSWYIGS
CCCCCCCCCEECCCCEEEEECCHHHHHHHHCCCEECCCCEEEEEEECCEEEECCEEEECC
KGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQM
CCCEEEEECCCCCCCCCHHEEEEECCCEEEEEECCEEEEEEECCCCCCCEEEHHHHHHHH
RRVFAFYVGYNYHF
HHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA