| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is mtaD [H]
Identifier: 108562694
GI number: 108562694
Start: 274606
End: 275835
Strand: Direct
Name: mtaD [H]
Synonym: HPAG1_0269
Alternate gene names: 108562694
Gene position: 274606-275835 (Clockwise)
Preceding gene: 108562693
Following gene: 108562695
Centisome position: 17.2
GC content: 39.84
Gene sequence:
>1230_bases ATGCAAGAAATCATAGGAGCGTCTTTAGTTTTTTTATGCAATGAAAAATGCGAAGTGTTAGAAGATTATGGCGTGGTCTT TGATGAAAAGATTGTTGAAATAGGCGATTATCAAAGTTTAACGCTTAAATACCCCCACTTAAAGGCGCAGTTTTTTGAAA ATTCCGTTCTGTTGCCCGCTTTTATCAACGCGCACACCCATTTTGAATTTTCCAACAACAAGGCGAGTTTTAATTACGGG AGTTTTTCTAGTTGGTTAGGGAGCGTGTTAAACAATGGGGGGGCGATTTTAGAAAATTGCCAAGGGGCTATTCAAAACGC CATCGCTGTGCAATTAAAAAGCGGGGTGGGGAGCGTGGGAGCGATTTCTAACCACCTGATAGAAGTTAATTTATTGAAAG AAAGCCCCTTGAGTGCTGTCGTGTTTTTAGAGTTTTTAGGGAGCAGTTATTCTTTAGAAAAATTAAAGGCGTTTGAGGCC AAGTTTAAGGAATTAAAAGATTTAGAAGATAAAAAACTTAAAGCGGCTCTCGCTGTGCATGCCCCTTATTCGGTCCAAAA AGACATGGCTTTGAGCGTCATCCAATTAGCTAAAGATTCACAAAGCCTGCTTTCTACGCATTTTTTAGAATCGCTTGAAG AATTAGAATGGGTAGAAAATTCTAAAGGGTGGTTTGAAAATTTTTACCAGCATTTTTTAAAAGAGTCTCATTTCAAATCG CTCTATAAGGGCGCGAACGATTACATTGACATGTTTGAAGACACGCACACTTTATTTGTGCATAACCAGTTCGCTTCTTT AGAAGCGTTAAAAAGGATTAAATCTCAAGTCAAAAACGCTTTTTTAATCACATGCCCCTTTTCTAACCGCTTGTTGAGCG GGAAAGCGTTGGATTTAGAGAGAGTTAGAGAAGCTGGTTTGAGCGTGAGCGTCGCCACTGATGGCTTGAGCTCTAACGTT TCTTTGAGCCTTTTAGACGAATTGAGGGCGTTCTTGCTCACCCATAACATGCCGTTGTTGGAATTAGCCAAGATCGCTCT TTTAGGAGCGACTAGGCATGGGGCTAAAGCTTTAGCTTTAAATAATGGCGAGATAGAAGCCAATAAGAGGGCGGATTTGA GCGTGTTTGGTTTTAATGAAAAATTCACTAAAGAGCAAGCAATTTTGCAATTTTTATTGCATGCTAAAGAAGTGGAACGC TTGTTTTTAGGGGGGAAAAGGGTAATCTAA
Upstream 100 bases:
>100_bases GAGTTAATAATCAAAATTCGCCCTTTTATGGTTTAGAATTATACGGCGAAGTTCAAAGAATGATTTTAAATGGGCAAACC ACATTGATTAAGGAGAATGC
Downstream 100 bases:
>100_bases TTTGTTTTAAAGACAGAATGCGTTAAAATGAGAAATCTAAATCAATTAAGGAAAGAGTCAATGAAATTAGTTTTAGCCAA GAATACGAGAAAATCAGACG
Product: chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPAFINAHTHFEFSNNKASFNYG SFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVGAISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEA KFKELKDLEDKKLKAALAVHAPYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLERVREAGLSVSVATDGLSSNV SLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALALNNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVER LFLGGKRVI
Sequences:
>Translated_409_residues MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPAFINAHTHFEFSNNKASFNYG SFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVGAISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEA KFKELKDLEDKKLKAALAVHAPYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLERVREAGLSVSVATDGLSSNV SLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALALNNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVER LFLGGKRVI >Mature_409_residues MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPAFINAHTHFEFSNNKASFNYG SFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVGAISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEA KFKELKDLEDKKLKAALAVHAPYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLERVREAGLSVSVATDGLSSNV SLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALALNNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVER LFLGGKRVI
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 45592; Mature: 45592
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPA CCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHHHHHCCCEEEHH FINAHTHFEFSNNKASFNYGSFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVG HHCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCH AISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEAKFKELKDLEDKKLKAALAVH HHHCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEE APYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLE HHCCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHH RVREAGLSVSVATDGLSSNVSLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALAL HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE NNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVERLFLGGKRVI CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQEIIGASLVFLCNEKCEVLEDYGVVFDEKIVEIGDYQSLTLKYPHLKAQFFENSVLLPA CCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCHHHHHHCCCEEEHH FINAHTHFEFSNNKASFNYGSFSSWLGSVLNNGGAILENCQGAIQNAIAVQLKSGVGSVG HHCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCH AISNHLIEVNLLKESPLSAVVFLEFLGSSYSLEKLKAFEAKFKELKDLEDKKLKAALAVH HHHCCEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEE APYSVQKDMALSVIQLAKDSQSLLSTHFLESLEELEWVENSKGWFENFYQHFLKESHFKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LYKGANDYIDMFEDTHTLFVHNQFASLEALKRIKSQVKNAFLITCPFSNRLLSGKALDLE HHCCCHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHH RVREAGLSVSVATDGLSSNVSLSLLDELRAFLLTHNMPLLELAKIALLGATRHGAKALAL HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEE NNGEIEANKRADLSVFGFNEKFTKEQAILQFLLHAKEVERLFLGGKRVI CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA