Click here to switch to the map view.

The map label for this gene is yxkA [H]

Identifier: 108562645

GI number: 108562645

Start: 224408

End: 224959

Strand: Reverse

Name: yxkA [H]

Synonym: HPAG1_0220

Alternate gene names: 108562645

Gene position: 224959-224408 (Counterclockwise)

Preceding gene: 108562653

Following gene: 108562639

Centisome position: 14.09

GC content: 42.03

Gene sequence:

>552_bases
ATGAAAACTTTTGAAGTAATGATTCAAACCGATTCAGAAGGGTATTTGGACGCTAAATTTGGCGGTAACGCTCCTAGAGG
GTTTCTCAATCCAAACGGCTTACCCACTTATTCGCCTAAAATCTCATGGCAAAAAGTGGAAGGCGCTCAAAGCTATGCGT
TAGAACTCATCGATCATGACGCGCAAAAAGTGTGCGGCATGTCGTTTGTCCATTGGGTCGTGGGCAATATTTCTTACAAT
GTTTTAGAAGAAAACGCTTCTATGATGGATAAAAGGATTACTCAAGGGGTCAATTCGCTCACTCAAGGCTTTATCCGTTC
TTCTCTTAATGAAAGCGAAAAACAACGCTCCAATCTCAACAATAGCGTCTATATCGGCCCCATGCCTCCTAATGGCGATC
ACCACTACTTAATTCAAGTGTATGCCCTAGACATTCCTAAACTCGCCTTAAAAGCCCCTTTTTTCTTAGGCGATTTGCAT
GACAAAATGCGTGGGCATATCATCGCCATAGGGAGAAAGGAATTTTTATACAAGCAGTTTGTGAGGAAATAA

Upstream 100 bases:

>100_bases
AAAAATGATTATTCTAATACCATGCTCCAAATTAAGATGTGTTTTTAGGATCATGCTACAATAAAAAACACAAAACGATT
TCAAAGAAAAAGGGCTTAAA

Downstream 100 bases:

>100_bases
ACTGCATGCTTGCAACTATCTTTCCGCTAAATTGAATTTTTGATACATTTCTAAAATCCTCTTTTCATCTAGCATGCTTT
GTTCAATCCTTGTGCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKTFEVMIQTDSEGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMSFVHWVVGNISYN
VLEENASMMDKRITQGVNSLTQGFIRSSLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH
DKMRGHIIAIGRKEFLYKQFVRK

Sequences:

>Translated_183_residues
MKTFEVMIQTDSEGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMSFVHWVVGNISYN
VLEENASMMDKRITQGVNSLTQGFIRSSLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH
DKMRGHIIAIGRKEFLYKQFVRK
>Mature_183_residues
MKTFEVMIQTDSEGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVCGMSFVHWVVGNISYN
VLEENASMMDKRITQGVNSLTQGFIRSSLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLH
DKMRGHIIAIGRKEFLYKQFVRK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20682; Mature: 20682

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFEVMIQTDSEGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHD
CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCH
AQKVCGMSFVHWVVGNISYNVLEENASMMDKRITQGVNSLTQGFIRSSLNESEKQRSNLN
HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
NSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRGHIIAIGRKEFLYKQF
CCEEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHCCCEEEEECHHHHHHHHH
VRK
HCC
>Mature Secondary Structure
MKTFEVMIQTDSEGYLDAKFGGNAPRGFLNPNGLPTYSPKISWQKVEGAQSYALELIDHD
CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCH
AQKVCGMSFVHWVVGNISYNVLEENASMMDKRITQGVNSLTQGFIRSSLNESEKQRSNLN
HHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
NSVYIGPMPPNGDHHYLIQVYALDIPKLALKAPFFLGDLHDKMRGHIIAIGRKEFLYKQF
CCEEECCCCCCCCCEEEEEEEEECCCHHHHHCCHHHHHHHHHCCCEEEEECHHHHHHHHH
VRK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]