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The map label for this gene is 108562539

Identifier: 108562539

GI number: 108562539

Start: 118350

End: 120236

Strand: Reverse

Name: 108562539

Synonym: HPAG1_0114

Alternate gene names: NA

Gene position: 120236-118350 (Counterclockwise)

Preceding gene: 108562540

Following gene: 108562536

Centisome position: 7.53

GC content: 37.31

Gene sequence:

>1887_bases
ATGATGGATATTTATCAAAAAAACTTGCAAGCTCTTTTCAAAAAAGACCCTCTTTTGTTCGCACAGCTCAAAGCCATTAA
AGAAAACAAAAAATACGAAGTGTTTTTAGGGAATGATAGCGCGAATTTCAACCTATTAGATAAAGAAACAAACACGCCCT
TATTTGAAAAAAGCCCGCTAGATTCAAGCTTAGAGCTATACAAAAATAGCGAAATTTACATGCTTTATCCTTATTTGTAT
TATTTTGGCTTGGGTAATGGGGTGTTTTATCGCTTGCTTTTGGGTAATGAAAATTTAAAACGCTTGGTGGTCATTGAGCC
TGAAATAGAGGTTATTTTCATTGTGCTGAATCTCTTGGATTTTTCCACTGAGATTTTAGAAAATCGTTTGATTTTATTGC
ATGCAAGTTTTTGCAATTACAACATGATCGCTTCATTATTTGATATGGATAAAAAGTCTCGTTTATACGCAAGAATGTAT
GATTTAAAACTTTTTAACGCTTATTATGAACGATACTCTCATCAAATGATAGAAATCAACCAGCATTTCACGCGCGCTTT
AGAACATGGCGCTATTAGCGTAGGCAATGACGCTAAAGACGCGCTCATAGGCATCAAACAGCATGCCGCTAATTTGCCTG
AAGTCATCAAAAGCCCTAGTTTAGTGGATTTTGTGAGCGCTTTAAAAAACAGAGACACCGCTATCATTGTTTCAACCGGA
CCCAGTTTGAACAAGCAGCTCCCTCTTTTAAAAGAAATCGCTCCTTACGCCACACTTTTTTGTATAGACGCTTCTTTCCC
TATTTTGGCTAAAGCCGGTATCAAGCCTGATATTGTGCTGTCTTTAGAAAGGGTGGATTTGACGGCGAAATTTTACGAAG
AAACCCCCTTAGATTTTCAAGAAGGCGTTATTTTTGCTCTGACTTCTATTGTGCATAAACGATTGATTCAAGCGATTAAA
AAGGGGGTTAAGCAATTCAGTTTCCGCCCCTTTGGTTATACCAACCTTTTTGATTTGCACCAGTATGGTTATGTGGGCAT
AGGCATGAGCGCAGCGAACATGGCGTATGAATTAGTGGTGCATTCTCGTTTCAAAAGATGCGTGTTTATCGGGCAAGATT
TGAGCTTTTCACAAAGCGGTAACAGCCACGCTAGTGGGGCGATTTATGGCGATAGAGAGATCAAGCCTAAAAAAGATAAA
GACAAGATTTTTATAGAAAAATACGGAGGTAATGGGGAAGTAGAGACCACTTTAGTGTGGAAACTTTTCTTAGAATTTTT
TGAAAAAGATATTTTCAACACGCCCTATAAACTAGAAGTCATTAACGCTACTGAAGGGGGGGCTAGGATTAAAGGGACTA
AAGAAATGCCTTTTAAAGAAGTGTGCGAAAAAATAGACAAATCCAAGCCAAAGCCTCCTATCAATCTTATTTATCCCACC
CAATCAGAGCAAGATAGAAATTTAAAGATCGCCAAGCAAAAATGCGAAGAAATCATCAAATACGCCAATGAGAAAAAAAC
GCAAGTTGAAGAAACGTTTTTAAAGGTGGCAGAATTTTTAGAAGAAGTGGAAAAGCTTCATGAAGAAAAAAAATTAGAAG
AGTTGGATTTTAAAGAATTAGAAAATTTGAGCGCTGAAATTGACAATATTAAAGAGCTTTTTGACGACAAGCGATTCAAT
TCGTATTTTATGGATGCGATACAATCTTACATCTTCCATCAGGAATTGCATATCGCTGAAATCGTGTGTAAAAAAACGAG
TAATGAAGACGGATTAAGGGCTAAGCAATTAGAATACATTTACGCGCACAAATACTGGCTTTTTAGTTTAGCGGGCGGGA
TGGATTGCGTGATAGAAGCGATCAAAATGGCTTTGAAAGAGTGGTAA

Upstream 100 bases:

>100_bases
CGAATGCGGTGCAACAGAATGTCTTAAGGCTTTTACAATAACAGCCCTTTTCATTCAAAAGGGCGTTAGCCCTTTTTATC
AGTTATTTTTATAAGTTAGA

Downstream 100 bases:

>100_bases
AACCCCTTTTTAAGCGTATGTGTCTAGGCTGGAATAAATTTCAGGGATATTTTCGCCACTAGCAAGGTTTTTCTCAACTT
GGGATCTATCTTTAATCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: PseD Protein

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MMDIYQKNLQALFKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIYMLYPYLY
YFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY
DLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK
KGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK
DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPT
QSEQDRNLKIAKQKCEEIIKYANEKKTQVEETFLKVAEFLEEVEKLHEEKKLEELDFKELENLSAEIDNIKELFDDKRFN
SYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYIYAHKYWLFSLAGGMDCVIEAIKMALKEW

Sequences:

>Translated_628_residues
MMDIYQKNLQALFKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIYMLYPYLY
YFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY
DLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK
KGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK
DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPT
QSEQDRNLKIAKQKCEEIIKYANEKKTQVEETFLKVAEFLEEVEKLHEEKKLEELDFKELENLSAEIDNIKELFDDKRFN
SYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYIYAHKYWLFSLAGGMDCVIEAIKMALKEW
>Mature_628_residues
MMDIYQKNLQALFKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIYMLYPYLY
YFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY
DLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK
KGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK
DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPT
QSEQDRNLKIAKQKCEEIIKYANEKKTQVEETFLKVAEFLEEVEKLHEEKKLEELDFKELENLSAEIDNIKELFDDKRFN
SYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYIYAHKYWLFSLAGGMDCVIEAIKMALKEW

Specific function: Unknown

COG id: COG2604

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72446; Mature: 72446

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDIYQKNLQALFKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPL
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCC
DSSLELYKNSEIYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLD
CCHHHHHCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHH
FSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEIN
HHHHHHHCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCEEEEECC
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQ
CCCCCCCCHHHHHCCHHEEEEECCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCHH
EGVIFALTSIVHKRLIQAIKKGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHH
HSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGEVETTLVW
HHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
KLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPT
HHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCHHHHHHHHHCCCCCCCEEEEECC
QSEQDRNLKIAKQKCEEIIKYANEKKTQVEETFLKVAEFLEEVEKLHEEKKLEELDFKEL
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
YAHKYWLFSLAGGMDCVIEAIKMALKEW
HHHHHEEHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDIYQKNLQALFKKDPLLFAQLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPL
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCC
DSSLELYKNSEIYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLD
CCHHHHHCCCCEEEEEHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHH
FSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEIN
HHHHHHHCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG
HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCEEEEECC
PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQ
CCCCCCCCHHHHHCCHHEEEEECCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCHH
EGVIFALTSIVHKRLIQAIKKGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHH
HSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGEVETTLVW
HHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH
KLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLIYPT
HHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCCHHHHHHHHHCCCCCCCEEEEECC
QSEQDRNLKIAKQKCEEIIKYANEKKTQVEETFLKVAEFLEEVEKLHEEKKLEELDFKEL
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTSNEDGLRAKQLEYI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
YAHKYWLFSLAGGMDCVIEAIKMALKEW
HHHHHEEHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA