| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is mboIBM [H]
Identifier: 108562518
GI number: 108562518
Start: 95740
End: 96561
Strand: Direct
Name: mboIBM [H]
Synonym: HPAG1_0093
Alternate gene names: 108562518
Gene position: 95740-96561 (Clockwise)
Preceding gene: 108562517
Following gene: 108562521
Centisome position: 6.0
GC content: 39.66
Gene sequence:
>822_bases ATGGGAGCGTCTTATCTTTCTTGTCCCATTTTTAAAAGCCAAGACCAGCTTTTCACCCTTTATCAAGGGGATTGCAATGA GGTTTTGCCCCAATTTGAAAATGCTTTTGATTTGATCTTTGCTGATCCGCCTTATTTCCTTTCTAATGACGGCTTAAGCA TACAGAGCGGTAAAATCGTGAGCGTCAATAAAGGCGATTGGGATAAAGAAAATGGGATTAACGATATTGATGAGTTTAAT TACCAGTGGATCAACAACGCCAAAAAGGCTTTAAAAAACACAGGAAGCCTTTTAATCAGCGGGACTTACCACAATATCTT TTCTTTGGGGCGCCTTTTACAAAAATTGGATTTTAAGATTTTAAACCTCATCACTTGGCAAAAAACCAATCCTCCTCCCA ATTTCAGCTGCCGTTATTTGACGCATTCGGCTGAGCAAATCATTTGGGCGAGGAAAAGCCGCAAGCATAAGCATGTTTTT AACTATGAGGTTTTAAAAAAGATCAATAATGATAAACAAATGCACGATGTGTGGAGCTTCCCAGCGATCGCTCCTTGGGA AAAAGTTAATGGCAAGCACCCCACTCAAAAACCTCTCGCTTTATTAGTGCGCTTGCTTTTAATGGCGAGCGATGAAAATT CCCTCATTGGCGATCCTTTTAGCGGGAGCTCTACCACAGGCATTGCGGCTAATCTTTTGAATAGGGAATTTATCGGCATA GAAAAAGAAAGCGAGTTTATCAAAATATCCATGGACAGAAAAATAGAATTAGACGCTCGCTATAAAGAAATCCGATCTAA AATCAAAGATTTAAACCACTAG
Upstream 100 bases:
>100_bases GCTTGATACGCCAATCGAGATGGAGGGTTTTGATAAAGTGCTTAATGATGAAGCAATGCAAAAACACATTAAAAATAAAG GCATTAACGCAGAATAAAAA
Downstream 100 bases:
>100_bases TAAAGCCCCTTTTTAAGCCGCTTTAAGCGTTATACTTTTGGGATTTTACCTCAAAATGGGATTCTATTTTCACCCATTCC TCACAAAGGATATTCTCATG
Product: type II adenine methyltransferase
Products: NA
Alternate protein names: M.MboIB; Adenine-specific methyltransferase MboIB; M.MboI C [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MGASYLSCPIFKSQDQLFTLYQGDCNEVLPQFENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFN YQWINNAKKALKNTGSLLISGTYHNIFSLGRLLQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSRKHKHVF NYEVLKKINNDKQMHDVWSFPAIAPWEKVNGKHPTQKPLALLVRLLLMASDENSLIGDPFSGSSTTGIAANLLNREFIGI EKESEFIKISMDRKIELDARYKEIRSKIKDLNH
Sequences:
>Translated_273_residues MGASYLSCPIFKSQDQLFTLYQGDCNEVLPQFENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFN YQWINNAKKALKNTGSLLISGTYHNIFSLGRLLQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSRKHKHVF NYEVLKKINNDKQMHDVWSFPAIAPWEKVNGKHPTQKPLALLVRLLLMASDENSLIGDPFSGSSTTGIAANLLNREFIGI EKESEFIKISMDRKIELDARYKEIRSKIKDLNH >Mature_272_residues GASYLSCPIFKSQDQLFTLYQGDCNEVLPQFENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNY QWINNAKKALKNTGSLLISGTYHNIFSLGRLLQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSRKHKHVFN YEVLKKINNDKQMHDVWSFPAIAPWEKVNGKHPTQKPLALLVRLLLMASDENSLIGDPFSGSSTTGIAANLLNREFIGIE KESEFIKISMDRKIELDARYKEIRSKIKDLNH
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MboI endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=276, Percent_Identity=27.8985507246377, Blast_Score=88, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 31312; Mature: 31181
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASYLSCPIFKSQDQLFTLYQGDCNEVLPQFENAFDLIFADPPYFLSNDGLSIQSGKIV CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCEECCCCCEEECCEEE SVNKGDWDKENGINDIDEFNYQWINNAKKALKNTGSLLISGTYHNIFSLGRLLQKLDFKI EECCCCCCCCCCCCCHHHHCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH LNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSRKHKHVFNYEVLKKINNDKQMHDVWSF HHHEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCC PAIAPWEKVNGKHPTQKPLALLVRLLLMASDENSLIGDPFSGSSTTGIAANLLNREFIGI CCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC EKESEFIKISMDRKIELDARYKEIRSKIKDLNH CCCCCEEEEECCCEEECHHHHHHHHHHHHHCCC >Mature Secondary Structure GASYLSCPIFKSQDQLFTLYQGDCNEVLPQFENAFDLIFADPPYFLSNDGLSIQSGKIV CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCEEEEECCCCCEECCCCCEEECCEEE SVNKGDWDKENGINDIDEFNYQWINNAKKALKNTGSLLISGTYHNIFSLGRLLQKLDFKI EECCCCCCCCCCCCCHHHHCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH LNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSRKHKHVFNYEVLKKINNDKQMHDVWSF HHHEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCC PAIAPWEKVNGKHPTQKPLALLVRLLLMASDENSLIGDPFSGSSTTGIAANLLNREFIGI CCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC EKESEFIKISMDRKIELDARYKEIRSKIKDLNH CCCCCEEEEECCCEEECHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8506128 [H]