| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is mtnN [H]
Identifier: 108562515
GI number: 108562515
Start: 92666
End: 93361
Strand: Reverse
Name: mtnN [H]
Synonym: HPAG1_0090
Alternate gene names: 108562515
Gene position: 93361-92666 (Counterclockwise)
Preceding gene: 108562516
Following gene: 108562514
Centisome position: 5.85
GC content: 42.82
Gene sequence:
>696_bases ATGGTGCAAAAAATTGGCATTTTAGGAGCGATGAGAGAAGAAATAACCCCTATACTAGAATTGTTTGGTGCGGGTTTTGA AGAGATCCCTTTAGGGGGGAATGTTTTCCATAAAGGCGTTTATTGCAACAAGGAAATCATTGTCGCTTATAGCAAGATTG GCAAGGTGCATTCCACTTTAACCACAACGAGCATGATTTTAGCGTTTGGCGTTCAAAAAGTGCTTTTTAGCGGGGTGGCT GGAAGCTTAGTTAAAGATTTAAAAATCAATGATTTGTTAGTGGCCAACCAATTAGTCCAGCATGATGTGGATTTGAGCGC GTTTGATCACCCTTTAGGGTTTATCCCAGAAAGTGCGATTTTTATTGAAACGAGTGAAAGTTTGAACGCTTTAGCTAAAA AAGTCGCTAATGAGCAGCATATCGCGCTCAAAGAAGGCGTCATCGCATCAGGCGATCAGTTTGTGCATAGCAAAGAAAGG AAAGAGTTTTTAGTTAGCGAGTTCAAAGCGAGCGCGGTGGAAATGGAGGGGGCGAGCGTGGCGTTTGTGTGCCAAAAATT TGGCGTGCCATGCTGCGTGCTAAGGAGCATTAGCGATAACGCTGACGAGGAAGCTAACATGAGCTTTGATGCGTTTTTAG AAAAAAGCGCTCAAACTTCAGCGAAATTCTTAAAAAGCATGGTGGATAAGCTTTAG
Upstream 100 bases:
>100_bases AACAAGCGATTGAGCAACAAGCCTACTATAAGCGTGGGGGATAATAAAGGGCTTGATGAAGCGATTGAGTTTTTAGAAGA ATACGTGTGATGGGGAAAAA
Downstream 100 bases:
>100_bases GGCTTGTTTTTATAGAGTTATGGAATGGAGTGGTGGAATGTAAAAAAGCTTTTTAGTATTTTTTACATTTTGTGATGAAT ATTTAATAAAGTGGGGAAAA
Product: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
Products: NA
Alternate protein names: 5'-methylthioadenosine nucleosidase; S-adenosylhomocysteine nucleosidase [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MVQKIGILGAMREEITPILELFGAGFEEIPLGGNVFHKGVYCNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVA GSLVKDLKINDLLVANQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKKVANEQHIALKEGVIASGDQFVHSKER KEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDKL
Sequences:
>Translated_231_residues MVQKIGILGAMREEITPILELFGAGFEEIPLGGNVFHKGVYCNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVA GSLVKDLKINDLLVANQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKKVANEQHIALKEGVIASGDQFVHSKER KEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDKL >Mature_231_residues MVQKIGILGAMREEITPILELFGAGFEEIPLGGNVFHKGVYCNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVA GSLVKDLKINDLLVANQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKKVANEQHIALKEGVIASGDQFVHSKER KEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDKL
Specific function: Responsible for cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH) [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786354, Length=233, Percent_Identity=34.7639484978541, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 25060; Mature: 25060
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQKIGILGAMREEITPILELFGAGFEEIPLGGNVFHKGVYCNKEIIVAYSKIGKVHSTL CCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCEEECCHHEEHHHHHHHHHHHH TTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVANQLVQHDVDLSAFDHPLGFIPESAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEE FIETSESLNALAKKVANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASV EEECHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDKL HHHHHHHCCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVQKIGILGAMREEITPILELFGAGFEEIPLGGNVFHKGVYCNKEIIVAYSKIGKVHSTL CCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHCCEEECCHHEEHHHHHHHHHHHH TTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVANQLVQHDVDLSAFDHPLGFIPESAI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEE FIETSESLNALAKKVANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASV EEECHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDKL HHHHHHHCCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]