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The map label for this gene is 108562513

Identifier: 108562513

GI number: 108562513

Start: 89004

End: 90377

Strand: Reverse

Name: 108562513

Synonym: HPAG1_0088

Alternate gene names: NA

Gene position: 90377-89004 (Counterclockwise)

Preceding gene: 108562514

Following gene: 108562512

Centisome position: 5.66

GC content: 40.1

Gene sequence:

>1374_bases
ATGCGTTATTTTCTTGTCGTTTTCTTGTTTTTGTTTGTGGGTTGCATGAAAAAGGATTTCACACTCAAAGATTTATCCTT
GCCCCAAGAGGCTTCAAGCTATCTTGCAAGCTCTCAAAATGGCAGTCATAATAACCAAAGCATTGACCCCCAAGCGTTAA
GAGAAAAATTAAAAGAGAGCTATCTCAAAGCGTGGTATTCCCCATGGCTAGATATGAAAGTCAAAAGCAATAAAAAAGAA
GTGTTTTGGATCCTTAAGGAGATGAATAAATCCACCGGTTATGGCGAAGATCTAAAACCCAACGCAAAAGCTTTCAATGA
TGAGCTTATTAAAAGCATGGATATTGAGCATTACCCGAGCGCTAAAATTAGGGCTGTTGTAGTGCGAGATAGCGATGTAA
GGGCTGTGCCTACTAACAAACCTTTTTATCTTTCTCCAAAAGGCTACCCTTTTGATAGGTATCAAAATTCGCTGATTTTT
CAAGGCACGCCGGTTTTAATCACGCATTTCAACACGGATAAAACTTACGCCCACATTCAAAGCAGTTTTGTTTATGGCTG
GATCAAAGTTAGCGATCTAGCTTACATGCGCGATAAAGATATAGAGCTTTTAACCCATCTTAAAGATTATGTCATGCCTA
TAAAAGATAAAATCCCCCTTTATACAGACTATGGGGATTTTTACACCGATGTTAGGGTGGGCGAATTGTTCGCCCTCATC
CCCCAAAGTCAAAACACACCTCAAAAACCCCAAAAAAAGGAATTGAAAGCCTACGGTTTTTTGAGAGACGCTAAGGGTTA
TGCAGCTTTACAAAGCGTGATCTTAGAAGAAAAGGATTTTTTTGTTTTCCCTAAGGCTTTTAACAGCGAGAACATGGCGT
ATTTTATAGACACCATGCTAGGGCAAAAATACGGCTGGGGCGGGCTATTGGGTAATAGGGATTGCTCGGCTTTCACTAGG
GATAGTTTTGCTAATTTTGGAATTTTACTCCCCAGAAATTCCTACGCGCAAAGCCGTTATGCGAACAATTATGTGGATTT
AAGCTCTATGAAAGCCAAAGAAAAAGAAGACTACATCCTTAAAAACGCCACGCCTTTTGGAACGCTCATCTATTTAAAAG
GGCATATCATGCTCTATTTAGGCGCACACAACCATCAAGCGATAGTCGCTCACAGCATTTGGTCGGTGCAAACCCAAAAG
CATTTTAAAACCTTGAGCCATAAAATAGGAGGCGTGGTGATCACTTCATTATGGCTAGCGGAAGAACATAACGGGGCGTT
TTCTAAAAAGAAATTATTGATTGATAGGGTGCTTGGAATGAGCGATTTGAAAGATTTTGTCAATAAAACTTCAAGCCCTT
TGAAGGCGAATTGA

Upstream 100 bases:

>100_bases
GCCAGATTGAAAGCTCTGCGATTAAAAAATTGAGAAGCCCGCAATACGGGCGCATTTTAAGAAATTATTTGCGCATTTGA
TGTTAAGGTTTCTCTAAAAC

Downstream 100 bases:

>100_bases
TTTTCTTATACTATGATTACGATTTATCAATTTAAAACATTTGGAGAAAGACAATGAGTATGGAATTTGATGCTGTTATT
ATTGGAGGTGGGGTTTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Cell Wall-Associated Hydrolase; Nlp/P60 Protein; NLP/P60 Family Lipoprotein; Cell Wall-Associated Hydrolases; Cell Wall-Associated Hydrolase Protein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A; NlpC-P60 Family Protein; NlpC/P60 Family Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNGSHNNQSIDPQALREKLKESYLKAWYSPWLDMKVKSNKKE
VFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPSAKIRAVVVRDSDVRAVPTNKPFYLSPKGYPFDRYQNSLIF
QGTPVLITHFNTDKTYAHIQSSFVYGWIKVSDLAYMRDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTDVRVGELFALI
PQSQNTPQKPQKKELKAYGFLRDAKGYAALQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTR
DSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYILKNATPFGTLIYLKGHIMLYLGAHNHQAIVAHSIWSVQTQK
HFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLKAN

Sequences:

>Translated_457_residues
MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNGSHNNQSIDPQALREKLKESYLKAWYSPWLDMKVKSNKKE
VFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPSAKIRAVVVRDSDVRAVPTNKPFYLSPKGYPFDRYQNSLIF
QGTPVLITHFNTDKTYAHIQSSFVYGWIKVSDLAYMRDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTDVRVGELFALI
PQSQNTPQKPQKKELKAYGFLRDAKGYAALQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTR
DSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYILKNATPFGTLIYLKGHIMLYLGAHNHQAIVAHSIWSVQTQK
HFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLKAN
>Mature_457_residues
MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNGSHNNQSIDPQALREKLKESYLKAWYSPWLDMKVKSNKKE
VFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPSAKIRAVVVRDSDVRAVPTNKPFYLSPKGYPFDRYQNSLIF
QGTPVLITHFNTDKTYAHIQSSFVYGWIKVSDLAYMRDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTDVRVGELFALI
PQSQNTPQKPQKKELKAYGFLRDAKGYAALQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTR
DSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYILKNATPFGTLIYLKGHIMLYLGAHNHQAIVAHSIWSVQTQK
HFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLKAN

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52427; Mature: 52427

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNGSHNNQSIDPQALREKLKES
CHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
YLKAWYSPWLDMKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPS
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
AKIRAVVVRDSDVRAVPTNKPFYLSPKGYPFDRYQNSLIFQGTPVLITHFNTDKTYAHIQ
CCEEEEEEECCCCEECCCCCCEEECCCCCCHHHHCCCEEEECCCEEEEEECCCCHHHHHH
SSFVYGWIKVSDLAYMRDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTDVRVGELFALI
HCEEEEEEEECCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCHHHEEEEC
PQSQNTPQKPQKKELKAYGFLRDAKGYAALQSVILEEKDFFVFPKAFNSENMAYFIDTML
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCEEHHHHHH
GQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIL
CCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCHHHHHHCCCCEEHHHHCCCCCCCEEE
KNATPFGTLIYLKGHIMLYLGAHNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLA
ECCCCCEEEEEEECEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHEE
EEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLKAN
CCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNGSHNNQSIDPQALREKLKES
CHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
YLKAWYSPWLDMKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIEHYPS
HHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
AKIRAVVVRDSDVRAVPTNKPFYLSPKGYPFDRYQNSLIFQGTPVLITHFNTDKTYAHIQ
CCEEEEEEECCCCEECCCCCCEEECCCCCCHHHHCCCEEEECCCEEEEEECCCCHHHHHH
SSFVYGWIKVSDLAYMRDKDIELLTHLKDYVMPIKDKIPLYTDYGDFYTDVRVGELFALI
HCEEEEEEEECCCHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCHHHEEEEC
PQSQNTPQKPQKKELKAYGFLRDAKGYAALQSVILEEKDFFVFPKAFNSENMAYFIDTML
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCEEHHHHHH
GQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYIL
CCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCHHHHHHCCCCEEHHHHCCCCCCCEEE
KNATPFGTLIYLKGHIMLYLGAHNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLA
ECCCCCEEEEEEECEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHEE
EEHNGAFSKKKLLIDRVLGMSDLKDFVNKTSSPLKAN
CCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA