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The map label for this gene is ureF [H]

Identifier: 108562495

GI number: 108562495

Start: 71132

End: 71899

Strand: Reverse

Name: ureF [H]

Synonym: HPAG1_0070

Alternate gene names: 108562495

Gene position: 71899-71132 (Counterclockwise)

Preceding gene: 108562496

Following gene: 108562494

Centisome position: 4.5

GC content: 41.41

Gene sequence:

>768_bases
ATGGATAATAAAGGAAAAAGCGTGAAAAGCACTGAAAAAAGCGTGGGCATGCCCCCAAAAACTCCAAAGACAGACAACAA
CGCTCATGTGGATAATGAATTTCTGATCTTGCAAGTCAATGATGCGGTGTTCCCTATTGGATCTTACACGCATTCTTTTG
GGCTAGAAACTTACATCCAGCAAAAAAAGGTTACCCATAAAGAAAGCGCTTTAGAATATTTAAAAGCCAATCTCTCTAGC
CAGTTCCTTTACACGGAAATGCTGAGCTTGAAACTCACCTATGAAAGCGCCCTCCAACAAGATTTAAAAAAGATCTTAGG
GGTTGAAGAAATGATTAGGCTATCCACAAGCCCCATGGAATTACGATTAGCCAATCAAAAGCTAGGCAATCGTTTCATTA
AAACCTTACAAGCCATGAACGAATTAGACATGGGCGCATTTTTTAACGCTTACGCTCAAAAAACCAAAGATCCCACCCAT
GCCACTAGCTATGGCGTTTTTGCGGCGAGTTTGGGGATTGAATTGAAAAAGGCTTTAAGGCATTATCTTTATGCGCAAAC
TTCTAACATGGTGATCAACTGCGTTAAAAGCGTCCCACTATCTCAAAACGATGGGCAAAAAATCTTATTGAGCTTGCAAA
GCCCTTTCAACCAACTCATAGAAAAAACCCTAGAACTAGACGAAAGCCACCTGTGCGCGGCAAGCGTTCAAAACGACATT
AAGGCGATGCAGCATGAGAGTTTATACTCGCGCCTTTATATGTCTTGA

Upstream 100 bases:

>100_bases
CCAAAGAGCGCTTAACCGTGAGCATGCCCCATAGTGAGCCTAATTTTAAGGTCTCACTAGCGAGCGATTTTAAAGTGGTC
ATGAAATAGAAAAGTAACAA

Downstream 100 bases:

>100_bases
ATTTTAATCTCAAATTGAAAGGAATTTTATGGTAAAAATTGGAGTTTGTGGTCCTGTAGGAAGCGGTAAAACCGCCTTGA
TTGAAGCTTTAACGCGCCAC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDNKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTHKESALEYLKANLSS
QFLYTEMLSLKLTYESALQQDLKKILGVEEMIRLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQKTKDPTH
ATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDI
KAMQHESLYSRLYMS

Sequences:

>Translated_255_residues
MDNKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTHKESALEYLKANLSS
QFLYTEMLSLKLTYESALQQDLKKILGVEEMIRLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQKTKDPTH
ATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDI
KAMQHESLYSRLYMS
>Mature_255_residues
MDNKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTHKESALEYLKANLSS
QFLYTEMLSLKLTYESALQQDLKKILGVEEMIRLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQKTKDPTH
ATSYGVFAASLGIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDI
KAMQHESLYSRLYMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 28725; Mature: 28725

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQ
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHH
QKKVTHKESALEYLKANLSSQFLYTEMLSLKLTYESALQQDLKKILGVEEMIRLSTSPME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHH
LRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQKTKDPTHATSYGVFAASLGIELKKALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDI
HHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KAMQHESLYSRLYMS
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQ
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHHHHH
QKKVTHKESALEYLKANLSSQFLYTEMLSLKLTYESALQQDLKKILGVEEMIRLSTSPME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHH
LRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQKTKDPTHATSYGVFAASLGIELKKALR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDI
HHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KAMQHESLYSRLYMS
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]