| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is ureG [H]
Identifier: 108562494
GI number: 108562494
Start: 70504
End: 71103
Strand: Reverse
Name: ureG [H]
Synonym: HPAG1_0069
Alternate gene names: 108562494
Gene position: 71103-70504 (Counterclockwise)
Preceding gene: 108562495
Following gene: 108562493
Centisome position: 4.45
GC content: 44.83
Gene sequence:
>600_bases ATGGTAAAAATTGGAGTTTGTGGTCCTGTAGGAAGCGGTAAAACCGCCTTGATTGAAGCTTTAACGCGCCACATGTCAAA GGATTACGACATGGCGGTTATCACTAATGATATTTACACTAAAGAAGACGCAGAGTTTATGTGTAAAAATTCGGTGATGC CACGAGAGAGGATCATTGGCGTAGAAACAGGAGGCTGTCCGCACACGGCTATTAGAGAAGACGCTTCTATGAATTTAGAA GCCGTAGAAGAAATGCATGGCCGTTTCCCTAATTTGGAATTGCTTTTGATTGAAAGCGGAGGCGATAACCTTTCGGCGAC TTTTAACCCAGAGCTAGCGGACTTTACGATTTTTGTGATTGATGTGGCTGAGGGCGATAAAATCCCCAGAAAAGGCGGCC CAGGAATCACGCGTTCAGACTTGCTTGTCATCAATAAGATTGACTTAGCCCCCTATGTGGGAGCGGACTTGAAAGTCATG GAAAGGGATTCTAAAAAAATGCGCGGCGAAAAGCCCTTTATTTTTACGAATATCCGCGCTAAAGAAGGCCTAGACGATGT GATCGCTTGGATCAAGCGCAACGCTTTATTGGAAGATTGA
Upstream 100 bases:
>100_bases GCGGCAAGCGTTCAAAACGACATTAAGGCGATGCAGCATGAGAGTTTATACTCGCGCCTTTATATGTCTTGAATTTTAAT CTCAAATTGAAAGGAATTTT
Downstream 100 bases:
>100_bases TGAACACTTACGCTCAAGAATCCAAGCTCAGGTTAAAAACCAAAATAGGGGCTGACGGGCGGTGCGTGATTGAAGACAAT TTCTTCACGCCCCCCTTTAA
Product: urease accessory protein UreG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIGVETGGCPHTAIREDASMNLE AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
Sequences:
>Translated_199_residues MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIGVETGGCPHTAIREDASMNLE AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED >Mature_199_residues MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIGVETGGCPHTAIREDASMNLE AVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVM ERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKRNALLED
Specific function: Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by ureG [H]
COG id: COG0378
COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003495 - InterPro: IPR012202 - InterPro: IPR004400 [H]
Pfam domain/function: PF02492 cobW [H]
EC number: NA
Molecular weight: Translated: 21956; Mature: 21956
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIG CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHEEE VETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVI EECCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEE DVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRA ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHCCCCCEEEEECCH KEGLDDVIAWIKRNALLED HCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MVKIGVCGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERIIG CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHEEE VETGGCPHTAIREDASMNLEAVEEMHGRFPNLELLLIESGGDNLSATFNPELADFTIFVI EECCCCCCHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCEEEEEE DVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRA ECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHCCCCCEEEEECCH KEGLDDVIAWIKRNALLED HCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA