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The map label for this gene is 108562463

Identifier: 108562463

GI number: 108562463

Start: 39542

End: 40522

Strand: Direct

Name: 108562463

Synonym: HPAG1_0038

Alternate gene names: NA

Gene position: 39542-40522 (Clockwise)

Preceding gene: 108562462

Following gene: 108562464

Centisome position: 2.48

GC content: 36.19

Gene sequence:

>981_bases
TTGATGCGTAAGGTTTTATATGCTCTCATGGGCTTTTTGTTGGCTTTTAGCGCTTTAAAAGCCGATGATTTTTTAGAAGA
AGCGAACGAAACAGCCCCGGCGAATTTAAACCACCCCATGCAGGATTTAAACGCCATTCAAGGGAGCTTTTTTGATAAAA
ACCGCTCAAAAATGTCCAACACTTTGAACATTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATG
GCGACTTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGCTTTGATGCGAAAATTTTAGA
AAGTAACGATCGTATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTA
AGATTTTTTCTTTCTATGTGTTTTCTACCACTTTCACCAGCTCCAAACACCCTAATTTACAGGTTTTTATAGAAGATAAA
AATTATTATTCTAACGCTTTTATCAAGCCCCAAAAAGAAAATATGGCTGAAAATGCCCCTAAAGATGCCCCCACAAACAA
CAAACCCTTAAAAGAAGAAAAAGAAGAAACCAAAGAAAAAGAAGAAGAGACTATAACTATTGGCGATAACACCAATGCGA
TGAAAATCGTTAAAAAAGACATTCAAAAAGGCTATAAGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATT
TGTTCTAAAAAATCCAAGCTCTCTTTGATGCCTAAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAA
AAGATTAGCGCTCTCTAAATTCCCCGTGATTTATAAGGTCGTTGATGGCTATGACAACCCGGTGAATACAAGGATTGTAG
GCGATTACATTATCGCTGAAGACGTTTCTGCTAAATGGACTTTAAGGCTGGGTAAGGACTATTTGTGTATCCGTTTTATC
AAAAAGGGTAAAGATGAATAA

Upstream 100 bases:

>100_bases
ACACCCCGGATTTTGATTACGCTTCCATGCCTAAAAACCCTACCGGCTTTAAAATCACCCGTTACAGCATTACTGAAATC
GCGCCGACTAACAGAGGCGA

Downstream 100 bases:

>100_bases
GTGGCTTAAGGGGGCACTTGTTTTTGTGGGGGGTTTTGCAACGATTACAACCATTTCTTTAATCTATCATCAAAAGCCAA
AAGCCCCCTTAAATAACCAA

Product: comB9 competence protein

Products: NA

Alternate protein names: Component Of Conjugal Plasmid Transfer System; DNA Transformation Competence; ComB2 Protein; ComB9-Like Competence Protein

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MMRKVLYALMGFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAM
ATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDK
NYYSNAFIKPQKENMAENAPKDAPTNNKPLKEEKEETKEKEEETITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLGI
CSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFI
KKGKDE

Sequences:

>Translated_326_residues
MMRKVLYALMGFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAM
ATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDK
NYYSNAFIKPQKENMAENAPKDAPTNNKPLKEEKEETKEKEEETITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLGI
CSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFI
KKGKDE
>Mature_326_residues
MMRKVLYALMGFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAM
ATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDK
NYYSNAFIKPQKENMAENAPKDAPTNNKPLKEEKEETKEKEEETITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLGI
CSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFI
KKGKDE

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37503; Mature: 37503

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKVLYALMGFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCC
TLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQI
EEEEEEEECCEEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCEEEEEEEEE
GVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYSNAFIKPQKENMAENAP
CCCCCCEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCC
KDAPTNNKPLKEEKEETKEKEEETITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLGI
CCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
CSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAE
CCCCCCCCCCCHHHCCCCCEEEEEECCHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEEC
DVSAKWTLRLGKDYLCIRFIKKGKDE
CCCCEEEEEECCCHHHHHHHHCCCCC
>Mature Secondary Structure
MMRKVLYALMGFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCC
TLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQI
EEEEEEEECCEEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCEEEEEEEEE
GVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYSNAFIKPQKENMAENAP
CCCCCCEEEECCCCEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCC
KDAPTNNKPLKEEKEETKEKEEETITIGDNTNAMKIVKKDIQKGYKALKSSQRKWYCLGI
CCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
CSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAE
CCCCCCCCCCCHHHCCCCCEEEEEECCHHHHHHCCEEEEEECCCCCCCCCEEEEEEEEEC
DVSAKWTLRLGKDYLCIRFIKKGKDE
CCCCEEEEEECCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA