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The map label for this gene is 108562448

Identifier: 108562448

GI number: 108562448

Start: 24612

End: 26678

Strand: Reverse

Name: 108562448

Synonym: HPAG1_0023

Alternate gene names: NA

Gene position: 26678-24612 (Counterclockwise)

Preceding gene: 108562449

Following gene: 108562447

Centisome position: 1.67

GC content: 43.73

Gene sequence:

>2067_bases
ATGAAGAAAAAATTTCTGTCATTAACTTTAGGTTCGCTTTTAGTTTCCACTTTAAGCGCTGAAGAGAACGGCTTTTTTGT
GAGCGCGGGTTATCAAATCGGCGAATCCGCTCAAATGGTGAAAAACACTAAAGGCATTCAAGAACTCTCAGACAGCTATG
AAAGATTGAACAATCTTTTAACGAGTTACAGCACCCTAAACACTCTTATTAGGCAGTCTGCCGACCCGAACGCTATCAAT
AACGCAAGGACCAATTTGAACGCGAGCGCGAAGAATTTAATCAACGATAAAAAGAATTCCCCAGCCTATCAAGCGGTGCT
TTTAGCCTTGAATGCAGCAGCAGGGTTGTGGCAAGTCATGAGCTATGCGATCAGCCCTTGTGGCCCTGGCAAAGACAGCA
ACAAAAATGGGGGCGTTCAAACCTTTGAAAACACACCAACAAATCAATGGGGAGGGACTACCATTACTTGTGGCACTACT
CAATATGAACCAGGACCATACAGCATTTTATCCACTGAAAATTACGCGAAAATCAATAAAGCCTATCAAATCATCCAAAA
GGCTTTTGGAGCAAGTGGGAAGGATATTCCTGCTTTAAGCGACACCAACACAGAACTTAAATTTACAATCAACAAAAAAA
ATGGGAACAATAATAATGGAGAAGAAATTGTTACAAAAAATAACGCTCAAGTTCTTTTAGAACAGGCTAGCACCATTATA
ACTACCCTTAATAGCGCATGCCCATGGATCAATAATGGTGGTGCAGGTGGTGCGAGTAGTGGTAGTTTATGGGAAGGAAT
ACATTTGAAAGGCGATGGGAGCGCGTGCGGGATTTTTAAGAATGAAATCAGCGCGATTCAAGACATGATCAAAAACGCTG
AAATAGCCGTAGAGCAATCCAAAATCGTTGCTGCAAACGCACAAAACCAGCACAACCTAGACACCGGGAAGACATTCAAC
CCCTATAAAGACGCTAGCTTTTCTCAAAGCATGTTCGCTAACGCTAGAGCGCAAGCGGAGATTTTAAACCGCGCTCAAGC
AGTGGTGAAGGACTTTGAAAGAATCCCTGCAGCGTTCGTGAAAGACTCTTTAGGAGTATGCCATGAAAAGGGTAGCGACG
GCAATCTCCGTGGCACGCCATCTGGCACGGTTACTTCTAACACTTGGGGAGCCGGTTGCGCGTATGTGGGAGAGACCGTA
ACGAATCTAAAAAACAGCATCGCTCATTTTGGCGACCAAGCCGAGCAAATCCATAACGCGCAAAACCTCGCCTACACTTT
AGCGAATTTCAGCGGTCAGTATAAAAAGCTAGGCGAACACTATGACAGCATCACAGCAACGCTCTCTAGCTTGCCTGACG
CTCAATCTTTACAAAATATGGTGAGCAAAAAGACTAACCCTAACAGCCCGCAAGGCATACAGGATAACTACTACATTGAC
TCCAATATCCATTCTCAAGTGCAATCTAGGACTCAAGAATTAGGCAGTAACCCTTTCAGACGCGCCGGGCTAATCGCCGC
TTCTACCACCAATAACGGCGCGATGAATGGGATCGGCTTTCAAGTGGGCTATAAGCAATTCTTTGGGAAAAACAAACGAT
GGGGCGCGAGATACTACGGCTTTGTGGATTACAACCACACCTATAACAAATCCCAATTTTTCAACTCCGATTCTGATGTT
TGGACTTATGGCGTGGGGAGCGATTTGTTAGTGAATTTCATCAACGATAAAGCCACTAAACACAATAAGATTTCTTTTGG
TGCGTTTGGCGGTATCCAACTAGCCGGGACTTCATGGCTTAATTCTCAGTATGTGAATTTAGCGAATGTGAATAACTACT
ATAAAGCTAAAATCAACACCTCTAACTTCCAATTCTTATTCAATCTGGGCTTAAGGACCAATCTCGCCAGAAATAAAAGA
AGAGGCGCTGAACATAGCGCGCAACATGGCATGGAATTAGGCGTGAAGATCCCCACGATCAACACGAATTACTATTCTTT
GCTAGGCACTACCTTGCAATACAGAAGGCTTTATAGCGTCTATCTCAACTATGTGTTTGCTTACTAA

Upstream 100 bases:

>100_bases
CTATATTAACGAAAGCTTGCGGTATGGTCTTACTTAAAGACACATTTGCGCAAGATTTACGGATAAAATCAATCTTATTT
CAAGAAGTAAAGGAGAAAAC

Downstream 100 bases:

>100_bases
AAGCTTAAACCCCCCTTTTTAAACCCTCTTTTTTGGGGGGGGTTAATCTTTTTTCACTGACTCCTCACTCGCTTTTTAAC
TTTTCATAAAGCTTTTATTT

Product: outer membrane protein HopD

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein HorE; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein,HopV SabB SabA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HopB; Outer Membrane Protein HorF; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopF; Outer Membrane Protein HopG

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MKKKFLSLTLGSLLVSTLSAEENGFFVSAGYQIGESAQMVKNTKGIQELSDSYERLNNLLTSYSTLNTLIRQSADPNAIN
NARTNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAISPCGPGKDSNKNGGVQTFENTPTNQWGGTTITCGTT
QYEPGPYSILSTENYAKINKAYQIIQKAFGASGKDIPALSDTNTELKFTINKKNGNNNNGEEIVTKNNAQVLLEQASTII
TTLNSACPWINNGGAGGASSGSLWEGIHLKGDGSACGIFKNEISAIQDMIKNAEIAVEQSKIVAANAQNQHNLDTGKTFN
PYKDASFSQSMFANARAQAEILNRAQAVVKDFERIPAAFVKDSLGVCHEKGSDGNLRGTPSGTVTSNTWGAGCAYVGETV
TNLKNSIAHFGDQAEQIHNAQNLAYTLANFSGQYKKLGEHYDSITATLSSLPDAQSLQNMVSKKTNPNSPQGIQDNYYID
SNIHSQVQSRTQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWGARYYGFVDYNHTYNKSQFFNSDSDV
WTYGVGSDLLVNFINDKATKHNKISFGAFGGIQLAGTSWLNSQYVNLANVNNYYKAKINTSNFQFLFNLGLRTNLARNKR
RGAEHSAQHGMELGVKIPTINTNYYSLLGTTLQYRRLYSVYLNYVFAY

Sequences:

>Translated_688_residues
MKKKFLSLTLGSLLVSTLSAEENGFFVSAGYQIGESAQMVKNTKGIQELSDSYERLNNLLTSYSTLNTLIRQSADPNAIN
NARTNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAISPCGPGKDSNKNGGVQTFENTPTNQWGGTTITCGTT
QYEPGPYSILSTENYAKINKAYQIIQKAFGASGKDIPALSDTNTELKFTINKKNGNNNNGEEIVTKNNAQVLLEQASTII
TTLNSACPWINNGGAGGASSGSLWEGIHLKGDGSACGIFKNEISAIQDMIKNAEIAVEQSKIVAANAQNQHNLDTGKTFN
PYKDASFSQSMFANARAQAEILNRAQAVVKDFERIPAAFVKDSLGVCHEKGSDGNLRGTPSGTVTSNTWGAGCAYVGETV
TNLKNSIAHFGDQAEQIHNAQNLAYTLANFSGQYKKLGEHYDSITATLSSLPDAQSLQNMVSKKTNPNSPQGIQDNYYID
SNIHSQVQSRTQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWGARYYGFVDYNHTYNKSQFFNSDSDV
WTYGVGSDLLVNFINDKATKHNKISFGAFGGIQLAGTSWLNSQYVNLANVNNYYKAKINTSNFQFLFNLGLRTNLARNKR
RGAEHSAQHGMELGVKIPTINTNYYSLLGTTLQYRRLYSVYLNYVFAY
>Mature_688_residues
MKKKFLSLTLGSLLVSTLSAEENGFFVSAGYQIGESAQMVKNTKGIQELSDSYERLNNLLTSYSTLNTLIRQSADPNAIN
NARTNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVMSYAISPCGPGKDSNKNGGVQTFENTPTNQWGGTTITCGTT
QYEPGPYSILSTENYAKINKAYQIIQKAFGASGKDIPALSDTNTELKFTINKKNGNNNNGEEIVTKNNAQVLLEQASTII
TTLNSACPWINNGGAGGASSGSLWEGIHLKGDGSACGIFKNEISAIQDMIKNAEIAVEQSKIVAANAQNQHNLDTGKTFN
PYKDASFSQSMFANARAQAEILNRAQAVVKDFERIPAAFVKDSLGVCHEKGSDGNLRGTPSGTVTSNTWGAGCAYVGETV
TNLKNSIAHFGDQAEQIHNAQNLAYTLANFSGQYKKLGEHYDSITATLSSLPDAQSLQNMVSKKTNPNSPQGIQDNYYID
SNIHSQVQSRTQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWGARYYGFVDYNHTYNKSQFFNSDSDV
WTYGVGSDLLVNFINDKATKHNKISFGAFGGIQLAGTSWLNSQYVNLANVNNYYKAKINTSNFQFLFNLGLRTNLARNKR
RGAEHSAQHGMELGVKIPTINTNYYSLLGTTLQYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75020; Mature: 75020

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFLSLTLGSLLVSTLSAEENGFFVSAGYQIGESAQMVKNTKGIQELSDSYERLNNLL
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TSYSTLNTLIRQSADPNAINNARTNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVM
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SYAISPCGPGKDSNKNGGVQTFENTPTNQWGGTTITCGTTQYEPGPYSILSTENYAKINK
HHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHH
AYQIIQKAFGASGKDIPALSDTNTELKFTINKKNGNNNNGEEIVTKNNAQVLLEQASTII
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHH
TTLNSACPWINNGGAGGASSGSLWEGIHLKGDGSACGIFKNEISAIQDMIKNAEIAVEQS
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECC
KIVAANAQNQHNLDTGKTFNPYKDASFSQSMFANARAQAEILNRAQAVVKDFERIPAAFV
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KDSLGVCHEKGSDGNLRGTPSGTVTSNTWGAGCAYVGETVTNLKNSIAHFGDQAEQIHNA
HHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
QNLAYTLANFSGQYKKLGEHYDSITATLSSLPDAQSLQNMVSKKTNPNSPQGIQDNYYID
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEC
SNIHSQVQSRTQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWGARYYG
CHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCCCCCCCCHHCCHHHHCCCCCCCCCEEEE
FVDYNHTYNKSQFFNSDSDVWTYGVGSDLLVNFINDKATKHNKISFGAFGGIQLAGTSWL
EEECCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCC
NSQYVNLANVNNYYKAKINTSNFQFLFNLGLRTNLARNKRRGAEHSAQHGMELGVKIPTI
CCCCEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCHHHHHCCCCCCEEEEEE
NTNYYSLLGTTLQYRRLYSVYLNYVFAY
CCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKKFLSLTLGSLLVSTLSAEENGFFVSAGYQIGESAQMVKNTKGIQELSDSYERLNNLL
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TSYSTLNTLIRQSADPNAINNARTNLNASAKNLINDKKNSPAYQAVLLALNAAAGLWQVM
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SYAISPCGPGKDSNKNGGVQTFENTPTNQWGGTTITCGTTQYEPGPYSILSTENYAKINK
HHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHH
AYQIIQKAFGASGKDIPALSDTNTELKFTINKKNGNNNNGEEIVTKNNAQVLLEQASTII
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHH
TTLNSACPWINNGGAGGASSGSLWEGIHLKGDGSACGIFKNEISAIQDMIKNAEIAVEQS
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECC
KIVAANAQNQHNLDTGKTFNPYKDASFSQSMFANARAQAEILNRAQAVVKDFERIPAAFV
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KDSLGVCHEKGSDGNLRGTPSGTVTSNTWGAGCAYVGETVTNLKNSIAHFGDQAEQIHNA
HHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH
QNLAYTLANFSGQYKKLGEHYDSITATLSSLPDAQSLQNMVSKKTNPNSPQGIQDNYYID
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEC
SNIHSQVQSRTQELGSNPFRRAGLIAASTTNNGAMNGIGFQVGYKQFFGKNKRWGARYYG
CHHHHHHHHHHHHHCCCCCHHHCEEEEECCCCCCCCCCCHHCCHHHHCCCCCCCCCEEEE
FVDYNHTYNKSQFFNSDSDVWTYGVGSDLLVNFINDKATKHNKISFGAFGGIQLAGTSWL
EEECCCCCCHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEECCCCEEEECCCCC
NSQYVNLANVNNYYKAKINTSNFQFLFNLGLRTNLARNKRRGAEHSAQHGMELGVKIPTI
CCCCEEEECCCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCHHHHHCCCCCCEEEEEE
NTNYYSLLGTTLQYRRLYSVYLNYVFAY
CCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA