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The map label for this gene is 108562445

Identifier: 108562445

GI number: 108562445

Start: 20619

End: 21836

Strand: Direct

Name: 108562445

Synonym: HPAG1_0020

Alternate gene names: NA

Gene position: 20619-21836 (Clockwise)

Preceding gene: 108562444

Following gene: 108562450

Centisome position: 1.29

GC content: 42.61

Gene sequence:

>1218_bases
ATGAAAAAATACAGCGCTATCCCCACCCCTTGCTATGTGCTAGAGAGCGAACGCTTAGAAAAAAACGCCAAGATTTTAGA
AATCGTGCGCCAACAAAGTGGGGCAAAGATCTTGCTCGCTTTAAAGGGATATGCGTTTTGGCGTGAGTTTGGGATTTTGA
GGCAAAAATTGAACGGGTGTTGCGCGAGCGGTCTTTATGAGGCTAAGCTCGCTTTTGAAGAATTTGGGGGGCGAGAGAGC
CACAAAGAAATTTGCGTTTATAGCCCGGCTTTTAAAGAGGCTGAAATGAGCGCGATTTTACCCCTAGCGACAAGCATCAT
TTTTAACTCTTTTTACCAATACGCCACCTATAAAGACAGGATTTTAGATAAAAACAAGCAATTAGAAAACTTGGGCTTAA
GCCCTATTAAAATGGGCTTGAGGATCAACCCTCTCTACAGCGAAGTAACCCCAGCGATCTATAACCCATGCTCTAAAATG
AGCCGGTTAGGGATTACGCCTAGCGGATTTGAAAAAGGGGTTAAAGAGCATGGCTTAGAGGGGGTGAGCGGGTTGCATTT
CCATACGCATTGCGAGCAAAACGCTGACGCTTTGTGCCGGACTTTAGAGCATGTAGAAAAGCATTTTAGGCCCTATTTAG
AAAATATGGCGTGGGTGAATTTTGGTGGGGGGCATCATATCACCAGGAGCGATTATGATGTGAATTTGCTCATCCAAACG
ATTAAGGATTTTAAAGAGCGTTATCATAATATAGAGGTGGTTTTAGAGCCCGGGGAAGCCATAGGGTGGCAATGCGGGTT
TTTAATCGCAAGCGTGATAGACATCGTTCAAAACGATCAAGAAATTGCGATTTTAGACGCTTCTTTTAGCGCTCACATGC
CCGATTGCTTAGAAATGCCTTATCGCCCTAGCATTTTTAAAATCTCCGTAGAAAATGATGAAGAGCTTATTGAAGTTGAA
AAGGGTGAAAATCAAGGGGCGTTTTCTTATTTTTTAGGCGGTCCTACTTGTTTAGCGGGGGATTTTATGGGGAGTTTTAG
CTTTGAGGCGCCTTTAAAAAGGGGCGATAAAATCGTGTTTCAAGACATGCTCCATTATACGATCGTCAAAAACAACTCGT
TTAATGGCGTGCCGCTCCCAAGCTTGGCTAAACTGGATCAACAAGGGTTTAAAATCCTTAAAAACTTTTCTTATGAAGAT
TATAAAAACAGAAATTAA

Upstream 100 bases:

>100_bases
CTAATGAAGACATGGCCAGGAGTTTGAAGGCCGATGATTTCATCTCCAAGTCTAACCCTAAAGACATCCAGCGGGTGGTT
AAGCAATTTTTGGAATTAGC

Downstream 100 bases:

>100_bases
AGCCTTTGATTAAGGCTTTTTGGGGCTTGTAAAAAGAGCCACGCACAACATTCCAACGCCAAGCCCGGCCAACACCGCAC
CAATGGTGTGCATGTCTAAA

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKKYSAIPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRES
HKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKM
SRLGITPSGFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQT
IKDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSIFKISVENDEELIEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFKILKNFSYED
YKNRN

Sequences:

>Translated_405_residues
MKKYSAIPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRES
HKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKM
SRLGITPSGFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQT
IKDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSIFKISVENDEELIEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFKILKNFSYED
YKNRN
>Mature_405_residues
MKKYSAIPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRES
HKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKM
SRLGITPSGFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQT
IKDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSIFKISVENDEELIEVE
KGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQGFKILKNFSYED
YKNRN

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45878; Mature: 45878

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYSAIPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGC
CCCCCCCCCCEEEECHHHHHCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
CASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDR
HHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLE
HHCCCCHHHHCCCCCEEECCEECCHHHHCCHHHHCHHHHHHHCCCCCHHHHHHHHHCCCC
GVSGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQT
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
IKDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMP
HHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCC
YRPSIFKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVF
CCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHCCCCHHH
QDMLHYTIVKNNSFNGVPLPSLAKLDQQGFKILKNFSYEDYKNRN
HHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKYSAIPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGC
CCCCCCCCCCEEEECHHHHHCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
CASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDR
HHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLE
HHCCCCHHHHCCCCCEEECCEECCHHHHCCHHHHCHHHHHHHCCCCCHHHHHHHHHCCCC
GVSGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQT
CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
IKDFKERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMP
HHHHHHHCCCEEEEEECCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCC
YRPSIFKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVF
CCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHCCCCHHH
QDMLHYTIVKNNSFNGVPLPSLAKLDQQGFKILKNFSYEDYKNRN
HHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA