| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is cheV [H]
Identifier: 108562444
GI number: 108562444
Start: 19657
End: 20622
Strand: Direct
Name: cheV [H]
Synonym: HPAG1_0019
Alternate gene names: 108562444
Gene position: 19657-20622 (Clockwise)
Preceding gene: 108562443
Following gene: 108562445
Centisome position: 1.23
GC content: 40.06
Gene sequence:
>966_bases ATGGCTGATAGTTTAGCAAGCATTGATCAAGTTACGAGTTTGCATAAAAATAACGAGTTGCAATTGTTGTGTTTCAGGCT GGGTAAAAACAAGGATTTGTATGCGGTCAATGTCTTTAAGATCCGTGAAGTGGTGAAATACCATGGCAACCTCACCATCA TTAGCCACGAAAACAATTCGCTCGTTGAAGGGCTAATCATTATAAGAGAGCTCACCATTCCCTTGATTGATATGAAAAAA TGGTTTTATTATGACAGCCAAAACAAAAACAAGGATTTACGCCCTTATAGGATAGAAAAAGAAAAAGGCGAAGACGATAT TGTTATGATTTGTGAGTTTTCTCGCTGGACCATAGGGGTTAGGATCTATGAAGCGGATAGGATTTTGAGCAAGAAATGGA CTGAAATGGAGCAAAGCGCTGGGTTAGGGGGATCTGCAGGCAATAACAAACTCGTGAGCCGCACGCGCTATTTTGATGGG CGCTTGGTGCAAGTGGTGGATATTGAAAAAATGCTTATAGATGTGTTCCCTTGGATTGAAGATGAAAAACACAACGATTT AGAGACGCTTTCTAAAATCCATTCTAACCAATGCGTTTTGCTCGCTGATGACTCCCCAAGCGTTTTAAAAACCATGCAAA TGATTTTAGACAAGCTGGGCGTCAAGCATATAGATTTTATCAATGGTAAAACCTTATTAGAGCATTTATTCAACCCAACA ACCGATGTGAGTAATATTGGTCTTATCATCACCGATTTAGAAATGCCAGAAGCGAGCGGTTTTGAAGTGATCAAGCAGGT TAAAAACAATCCTTTGACTTCAAAAATCCCTATCGTGGTCAATTCTTCTATGAGTGGCAGTTCTAATGAAGACATGGCCA GGAGTTTGAAGGCCGATGATTTCATCTCCAAGTCTAACCCTAAAGACATCCAGCGGGTGGTTAAGCAATTTTTGGAATTA GCATGA
Upstream 100 bases:
>100_bases AATGATTTAAAAAAACCCCAAAGTTTTAAGTGTCGTTGGCATTAAGTGCAAACACGATATAATTATAAAACGATACGAAA ACCTAAATTAAGGGGAAATC
Downstream 100 bases:
>100_bases AAAAATACAGCGCTATCCCCACCCCTTGCTATGTGCTAGAGAGCGAACGCTTAGAAAAAAACGCCAAGATTTTAGAAATC GTGCGCCAACAAAGTGGGGC
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MADSLASIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKK WFYYDSQNKNKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDG RLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPT TDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKSNPKDIQRVVKQFLEL A
Sequences:
>Translated_321_residues MADSLASIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKK WFYYDSQNKNKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDG RLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPT TDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKSNPKDIQRVVKQFLEL A >Mature_320_residues ADSLASIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKW FYYDSQNKNKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGR LVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTT DVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISKSNPKDIQRVVKQFLELA
Specific function: Chemotaxis involves both a phosphorylation-dependent excitation and a methylation-dependent adaptation. CheV and CheW function together to couple CheA activation to methyl-accepting chemotaxis protein receptor status and possible CheA-dependent phosphoryl
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 36618; Mature: 36486
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50851 CHEW ; PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSLASIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNS CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCC LVEGLIIIRELTIPLIDMKKWFYYDSQNKNKDLRPYRIEKEKGEDDIVMICEFSRWTIGV HHHHHHHHHHHHCCCEEHHHHEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEE RIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIE EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHCCCC DEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPT CCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCC TDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADD CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCHHH FISKSNPKDIQRVVKQFLELA HHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure ADSLASIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNS CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCC LVEGLIIIRELTIPLIDMKKWFYYDSQNKNKDLRPYRIEKEKGEDDIVMICEFSRWTIGV HHHHHHHHHHHHCCCEEHHHHEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCEEEEE RIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIE EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHCCCC DEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPT CCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCC TDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADD CCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHCHHH FISKSNPKDIQRVVKQFLELA HHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169223; 9384377; 8169224 [H]