| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023510
Identifier: 107023510
GI number: 107023510
Start: 2163306
End: 2163710
Strand: Reverse
Name: 107023510
Synonym: Bcen_1961
Alternate gene names: NA
Gene position: 2163710-2163306 (Counterclockwise)
Preceding gene: 107023514
Following gene: 107023509
Centisome position: 65.68
GC content: 71.36
Gene sequence:
>405_bases TTGCGGGCGTGCGGACTGCGGTGGCCGCGCGGCGCGCATCATGCCGGCGCGGCGATCGGCCAGGCGGACGCCCGCGTCGG CGACGCGCGCGATGCCGTGCATCGGGTCGTGAAAGCGGGAAAAGGCGAGAGGTTGGCGCGCCGCGCACTCGGTGAACCGG GCGCGCGCCATCGCGATGGCGCGATGGATGTAGCGGCGACGGGGCCCGCGACGCGGGCGATGTCTGTTAAGGCGTGCATA TCGATGTTCCGGCAGATGATGTGGGCATCGGGGTCGGGCATGCATCGGACGCTGCGCGGGTGCGACGGGTTGGCCGCCGC TTGCGCGTGCCTAAGTGTAGACGAGAAACACGCGGCGGGGCGCGTGCGGCGCCCTGTCCGATCTGCCAGTTGTGCGCACG AGTGA
Upstream 100 bases:
>100_bases TGCATCGCAAGCTCGGGCGAAGCGTGAAACGTCGGGTCGGGCCGCATGCTCATGGTGATGTCCTCTGAATGGTGTCGAAT CGTGGACGCACGGCCGTTCG
Downstream 100 bases:
>100_bases GATACTTGACGAAGTGCCGCTGCCTCCCGCCTCGCGGGGCGGGCAGCGGCGATGCGAAACGATGGCGCCGGCACTGGCGT GCCGGCTGCCGTCATCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRACGLRWPRGAHHAGAAIGQADARVGDARDAVHRVVKAGKGERLARRALGEPGARHRDGAMDVAATGPATRAMSVKACI SMFRQMMWASGSGMHRTLRGCDGLAAACACLSVDEKHAAGRVRRPVRSASCAHE
Sequences:
>Translated_134_residues MRACGLRWPRGAHHAGAAIGQADARVGDARDAVHRVVKAGKGERLARRALGEPGARHRDGAMDVAATGPATRAMSVKACI SMFRQMMWASGSGMHRTLRGCDGLAAACACLSVDEKHAAGRVRRPVRSASCAHE >Mature_134_residues MRACGLRWPRGAHHAGAAIGQADARVGDARDAVHRVVKAGKGERLARRALGEPGARHRDGAMDVAATGPATRAMSVKACI SMFRQMMWASGSGMHRTLRGCDGLAAACACLSVDEKHAAGRVRRPVRSASCAHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14095; Mature: 14095
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACGLRWPRGAHHAGAAIGQADARVGDARDAVHRVVKAGKGERLARRALGEPGARHRDG CCCCCCCCCCCCCHHHHHHCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC AMDVAATGPATRAMSVKACISMFRQMMWASGSGMHRTLRGCDGLAAACACLSVDEKHAAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHH RVRRPVRSASCAHE HHHHHHHHHCCCCC >Mature Secondary Structure MRACGLRWPRGAHHAGAAIGQADARVGDARDAVHRVVKAGKGERLARRALGEPGARHRDG CCCCCCCCCCCCCHHHHHHCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC AMDVAATGPATRAMSVKACISMFRQMMWASGSGMHRTLRGCDGLAAACACLSVDEKHAAG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHH RVRRPVRSASCAHE HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA