| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is eamA [H]
Identifier: 107023502
GI number: 107023502
Start: 2155257
End: 2156138
Strand: Reverse
Name: eamA [H]
Synonym: Bcen_1953
Alternate gene names: 107023502
Gene position: 2156138-2155257 (Counterclockwise)
Preceding gene: 107023505
Following gene: 107023499
Centisome position: 65.45
GC content: 68.93
Gene sequence:
>882_bases ATGATGGCCCCGAAGGACTTGCTGCTCGCGCTGGTCGTGATCCTCGCGTGGGGCGTGAACTTCGTCGTGATCAAGGTCGG CCTGCACGGCATGCCGCCGATGCTGCTCGGCGCGCTGCGCTTCACGCTCGCGGCCGTGCCCGCGGTGTTCTTCGTGCGCC GGCCGCAGATTTCGTGGCGGCTGCTGGTGCTGTACGGCGCGACGATCCAGCTCGGCCAGTTCGTGTTCCTGTTCACCGGC ATGTACGTCGGCATGCCGGCCGGCCTCGCATCGCTCGTGCTGCAGTCGCAGGCGTTCTTCACGCTGGTGTTCGCGATGCT GTTCCTCGGCGAGCGGCTGCGCGTGCAGAACCTGGTCGGGCTCGCGATTGCCGCGGGCGGGCTCGTCGTGATCGCCGCGC AGGGCGGCCGCGCGATGACGCTCGCGGGCTTCCTGCTGACGATCTGCTCGGCCGCGATGTGGGCCGTCGGCAATATCGTC ACGAAGAAGGTCGGCAAGGCGAACCTCGTGTCGCTCGTCGTGTGGGCGAGCCTTGTGCCGCCCGTGCCGTTCTTCCTGCT GTCGCTGTGGTTCGAAGGGCCGCAGCGGATCGCGACCGCGCTCGCCGGGCTCGACGGCGCATCGATCTTCGCGGTCGTTT ATCTCGCGTTCGTCGCGACGCTGCTCGGCTACGGGCTGTGGAGCCGCCTGCTGTCGCGCTACCCGGCCGCGCAGGTCGCG CAATTCTCCCTGCTGGTGCCGATCATCGGGCTCGCGTCGTCGGCGCTGCTGCTCGACGAGCATCTGACGCAGGCGCAGTT GATCGGCGCCGCGCTCGTGATGGGCGGGCTCGCGGTGAACGTGTTCGGCGGGAAACTGCTGAGCCGCTTCGCGGCGTCGT GA
Upstream 100 bases:
>100_bases CCGCCGATTCCATACGCGCCGCGCGGGTATCGGGCCGGGCGGCGAAACCCGGTAGACTGACCGGCTTCATACCGACAATT CGACAATCGAGGAGACGCCG
Downstream 100 bases:
>100_bases CGCGCCGGCACGCACTGCGTGCCGGCGGGGGGAAGCGGTGGCGCTCAGGCCATCCGGCTCTTCGCGAGCGGCGGATTCGC GGCGAAATAGCGCTTGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MMAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRLLVLYGATIQLGQFVFLFTG MYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGLAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIV TKKVGKANLVSLVVWASLVPPVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVA QFSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS
Sequences:
>Translated_293_residues MMAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRLLVLYGATIQLGQFVFLFTG MYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGLAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIV TKKVGKANLVSLVVWASLVPPVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVA QFSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS >Mature_293_residues MMAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWRLLVLYGATIQLGQFVFLFTG MYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVGLAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIV TKKVGKANLVSLVVWASLVPPVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVA QFSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=288, Percent_Identity=50.6944444444444, Blast_Score=266, Evalue=8e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30987; Mature: 30987
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWR CCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE LLVLYGATIQLGQFVFLFTGMYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVG EEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVTKKVGKANLVSLVVWASLVP HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVA CHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QFSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMAPKDLLLALVVILAWGVNFVVIKVGLHGMPPMLLGALRFTLAAVPAVFFVRRPQISWR CCCHHHHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE LLVLYGATIQLGQFVFLFTGMYVGMPAGLASLVLQSQAFFTLVFAMLFLGERLRVQNLVG EEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LAIAAGGLVVIAAQGGRAMTLAGFLLTICSAAMWAVGNIVTKKVGKANLVSLVVWASLVP HHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC PVPFFLLSLWFEGPQRIATALAGLDGASIFAVVYLAFVATLLGYGLWSRLLSRYPAAQVA CHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QFSLLVPIIGLASSALLLDEHLTQAQLIGAALVMGGLAVNVFGGKLLSRFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]