Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is yjeS [H]

Identifier: 107023499

GI number: 107023499

Start: 2151900

End: 2153135

Strand: Reverse

Name: yjeS [H]

Synonym: Bcen_1950

Alternate gene names: 107023499

Gene position: 2153135-2151900 (Counterclockwise)

Preceding gene: 107023502

Following gene: 107023498

Centisome position: 65.35

GC content: 70.39

Gene sequence:

>1236_bases
ATGAACCGACTACCGGAACGCGCCGCATCCGACAGGCCTTCGACTCGTGACGAAGGCGCGGCGCCGTGCGCGCTCGACGA
TGCGGCGTTGACTGCGCTCGCCGCTCGCATCAGGGCGTGGGGGCGCGAATTGGGTTTCGGGGCGATCGGCATCAGCGATA
CCGATCTCTCGGATGCCGAAGCGGGCCTCGCCGCCTGGCTGGAAGCCGGATACCACGGCGAAATGGATTATATGGCGAAA
CATGGGATGAAACGCGCGCGGCCGGCCGAACTTGTGGCCGGTACGCGACGCGTGATCTCCGTGCGGCTCGCCTATTTGCC
GGGCCAAACGCTCGCGGCCGACGCGCCCGCTGGCGAGCCCGGCGCGCTCGTGCCGCACGACTGGCGCGCGCGCGAACGGG
CGCGGCTCGAGGATCCGCAGGCGGCCGTCGTGTCGATCTATGCGCGCGGCCGCGACTATCACAAGGTGCTGCGCAACCGG
CTGCAGACACTCGCGGAGCGCATCGAGCACGAGATCGGCGGGTTCGGCTACCGCGTGTTCACCGATTCGGCGCCCGTGCT
CGAGGTCGAACTCGCGCAGAAGGCCGGAGTCGGCTGGCGCGGCAAGCACACGCTGCTGCTGCAGCGCGATGCCGGCTCGC
TGTTCTTTCTCGGCGAGATCTACGTCGACCTGCCGCTGCCGACCGACGCGCACACGTTGCCCGACACCGCGCCCGAGACG
CCCGGTGCGCACTGCGGCAGCTGCACCCGCTGCATCGACGCGTGCCCGACCGGTGCGATCGTCGAGCCGTATCGCGTCGA
TGCGCGCCGCTGCATCTCGTACCTGACGATCGAACTGAAAGGCAGCATCCCCGAGCCGCTGCGGCCGATGATCGGCAATC
GCGTGTACGGCTGCGACGACTGCCAGCTCGTGTGCCCGTGGAACAAGTTCGCGCAGGCCGCGCCCGTCGCCGATTTCGAC
GTGCGGCACGGCCTCGACCGCGCGACGCTCGTCGAGCTGTTCGCGTGGGACGCGGAGGCATTCGACACGCGGATGCAGGG
CAGCGCGATCCGGCGCATCGGCTACGAAAGTTGGCTGCGCAATCTCGCGGTCGGGCTCGGCAATGCGCTGCGCGCCGGCG
CGGACCGGCTCGCGCCGCCCGCGCGCGATGCGATCGTCGCCGCGCTGCGCGCCCGGGCCGACGATCCGTCGCCGGTCGTG
CGCGAGCATGTCGAATGGGCGCTGCGAGCCGCGTGA

Upstream 100 bases:

>100_bases
GCTTCGTCGGCGAGCGCGACCACGCGCTCCGCGAGCGGGGCGGGCAACGTGGCATGAGGCGGTTGGCTGGACGTGGCTGG
CATTCTCGTAAAATAGTGCG

Downstream 100 bases:

>100_bases
AGGCGGCGTAAAGTGTCGTCGGCGCGTGCGCAGGGCCGCGCGCGCATCCCTCGGTCAGGAGAATTCAATGTTCAACGCTG
TCATCGACGCGCCGTTCGGC

Product: 4Fe-4S cluster binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MNRLPERAASDRPSTRDEGAAPCALDDAALTALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAK
HGMKRARPAELVAGTRRVISVRLAYLPGQTLAADAPAGEPGALVPHDWRARERARLEDPQAAVVSIYARGRDYHKVLRNR
LQTLAERIEHEIGGFGYRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDLPLPTDAHTLPDTAPET
PGAHCGSCTRCIDACPTGAIVEPYRVDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFD
VRHGLDRATLVELFAWDAEAFDTRMQGSAIRRIGYESWLRNLAVGLGNALRAGADRLAPPARDAIVAALRARADDPSPVV
REHVEWALRAA

Sequences:

>Translated_411_residues
MNRLPERAASDRPSTRDEGAAPCALDDAALTALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAK
HGMKRARPAELVAGTRRVISVRLAYLPGQTLAADAPAGEPGALVPHDWRARERARLEDPQAAVVSIYARGRDYHKVLRNR
LQTLAERIEHEIGGFGYRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDLPLPTDAHTLPDTAPET
PGAHCGSCTRCIDACPTGAIVEPYRVDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFD
VRHGLDRATLVELFAWDAEAFDTRMQGSAIRRIGYESWLRNLAVGLGNALRAGADRLAPPARDAIVAALRARADDPSPVV
REHVEWALRAA
>Mature_411_residues
MNRLPERAASDRPSTRDEGAAPCALDDAALTALAARIRAWGRELGFGAIGISDTDLSDAEAGLAAWLEAGYHGEMDYMAK
HGMKRARPAELVAGTRRVISVRLAYLPGQTLAADAPAGEPGALVPHDWRARERARLEDPQAAVVSIYARGRDYHKVLRNR
LQTLAERIEHEIGGFGYRVFTDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDLPLPTDAHTLPDTAPET
PGAHCGSCTRCIDACPTGAIVEPYRVDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDDCQLVCPWNKFAQAAPVADFD
VRHGLDRATLVELFAWDAEAFDTRMQGSAIRRIGYESWLRNLAVGLGNALRAGADRLAPPARDAIVAALRARADDPSPVV
REHVEWALRAA

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=379, Percent_Identity=52.5065963060686, Blast_Score=396, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 44754; Mature: 44754

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLPERAASDRPSTRDEGAAPCALDDAALTALAARIRAWGRELGFGAIGISDTDLSDAE
CCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHH
AGLAAWLEAGYHGEMDYMAKHGMKRARPAELVAGTRRVISVRLAYLPGQTLAADAPAGEP
HHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEECCCCCCCC
GALVPHDWRARERARLEDPQAAVVSIYARGRDYHKVLRNRLQTLAERIEHEIGGFGYRVF
CCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDLPLPTDAHTLPDTAPET
ECCCCEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
PGAHCGSCTRCIDACPTGAIVEPYRVDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDD
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCCCCCCC
CQLVCPWNKFAQAAPVADFDVRHGLDRATLVELFAWDAEAFDTRMQGSAIRRIGYESWLR
CEEECCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NLAVGLGNALRAGADRLAPPARDAIVAALRARADDPSPVVREHVEWALRAA
HHHHHCCHHHHHCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRLPERAASDRPSTRDEGAAPCALDDAALTALAARIRAWGRELGFGAIGISDTDLSDAE
CCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHH
AGLAAWLEAGYHGEMDYMAKHGMKRARPAELVAGTRRVISVRLAYLPGQTLAADAPAGEP
HHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEECCCCCEECCCCCCCC
GALVPHDWRARERARLEDPQAAVVSIYARGRDYHKVLRNRLQTLAERIEHEIGGFGYRVF
CCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TDSAPVLEVELAQKAGVGWRGKHTLLLQRDAGSLFFLGEIYVDLPLPTDAHTLPDTAPET
ECCCCEEEEEEHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
PGAHCGSCTRCIDACPTGAIVEPYRVDARRCISYLTIELKGSIPEPLRPMIGNRVYGCDD
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCCCCCCC
CQLVCPWNKFAQAAPVADFDVRHGLDRATLVELFAWDAEAFDTRMQGSAIRRIGYESWLR
CEEECCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
NLAVGLGNALRAGADRLAPPARDAIVAALRARADDPSPVVREHVEWALRAA
HHHHHCCHHHHHCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]