Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is 107023293

Identifier: 107023293

GI number: 107023293

Start: 1934087

End: 1934545

Strand: Reverse

Name: 107023293

Synonym: Bcen_1744

Alternate gene names: NA

Gene position: 1934545-1934087 (Counterclockwise)

Preceding gene: 107023295

Following gene: 107023285

Centisome position: 58.72

GC content: 64.27

Gene sequence:

>459_bases
TTGGAGCGAATCATGAAACAGATCAATAAAACGGTGACGGAACGGCTGCTGCACGCGCTGACGTTCGAACTGGTGGCGAT
CGCGCTGTGCGCGCCGATCGGCGCATGGCTGCTCGACATGCCGGTATCGCACGTCGGCGTGCTGACGGTGATGGTGTCGC
TGATCGCGATGGCGTGGAACATGACGTTCAACACGCTGTTCGACCGCTTCGAGCGCCGGGCCGGGTTGTCGCGCACGCTC
GGCATGCGGGTCGCGCACGCGGTGACGTTCGAGCTTGGCCTCGTCGCGATGGTGGTGCCGGTTGCCGCGTGGTGGCTGAA
CGTGAGCCTCGTCGAGGCGCTGTTGCTCGACCTCGGTATCGTGCTGTTCTTCCTGCCTTACACGTTCTGCTTCAACCTCG
CGTACGACGCGCTGCGCGCCCGCTGGATGGCACGCCGGGTTACGGTGCAGGCAGGTTGA

Upstream 100 bases:

>100_bases
GCAGGGCTCCTGGCAGCGTTATATCGGTAAAACCGATGATATCAAACTGGATTCATACGGTTGTGCCGATCAAAATGGCC
GACATGGATCAGGTAACGCA

Downstream 100 bases:

>100_bases
GCGGGTGAGGCGGACCAGACCGGACAGGGCGACGGCCGGCGCCCGTCAGCGCGCGGCCCACAGCCACACGCTGCACACCA
CGGCGACCGCGCCGTACACG

Product: transmembrane pair

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Bacterial Transmembrane Pair Family Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MERIMKQINKTVTERLLHALTFELVAIALCAPIGAWLLDMPVSHVGVLTVMVSLIAMAWNMTFNTLFDRFERRAGLSRTL
GMRVAHAVTFELGLVAMVVPVAAWWLNVSLVEALLLDLGIVLFFLPYTFCFNLAYDALRARWMARRVTVQAG

Sequences:

>Translated_152_residues
MERIMKQINKTVTERLLHALTFELVAIALCAPIGAWLLDMPVSHVGVLTVMVSLIAMAWNMTFNTLFDRFERRAGLSRTL
GMRVAHAVTFELGLVAMVVPVAAWWLNVSLVEALLLDLGIVLFFLPYTFCFNLAYDALRARWMARRVTVQAG
>Mature_152_residues
MERIMKQINKTVTERLLHALTFELVAIALCAPIGAWLLDMPVSHVGVLTVMVSLIAMAWNMTFNTLFDRFERRAGLSRTL
GMRVAHAVTFELGLVAMVVPVAAWWLNVSLVEALLLDLGIVLFFLPYTFCFNLAYDALRARWMARRVTVQAG

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17112; Mature: 17112

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIMKQINKTVTERLLHALTFELVAIALCAPIGAWLLDMPVSHVGVLTVMVSLIAMAWN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MTFNTLFDRFERRAGLSRTLGMRVAHAVTFELGLVAMVVPVAAWWLNVSLVEALLLDLGI
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLFFLPYTFCFNLAYDALRARWMARRVTVQAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERIMKQINKTVTERLLHALTFELVAIALCAPIGAWLLDMPVSHVGVLTVMVSLIAMAWN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MTFNTLFDRFERRAGLSRTLGMRVAHAVTFELGLVAMVVPVAAWWLNVSLVEALLLDLGI
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLFFLPYTFCFNLAYDALRARWMARRVTVQAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA