Click here to switch to the map view.

The map label for this gene is yoaF [C]

Identifier: 107023221

GI number: 107023221

Start: 1851798

End: 1852079

Strand: Reverse

Name: yoaF [C]

Synonym: Bcen_1671

Alternate gene names: 107023221

Gene position: 1852079-1851798 (Counterclockwise)

Preceding gene: 107023222

Following gene: 107023220

Centisome position: 56.22

GC content: 70.92

Gene sequence:

>282_bases
ATGTCCGTCCGTCTGGTCGTCATCTGTGCGCTGGCGCTGGTCGCGCCCGGCGCGTTCGCCCAGCCGTTGCCGCCCGGGCA
GCAGCCGCCCGCGCAGGTGGCGCTGGCCAATCCTGCGTCGGTCAACTGCGAGAAGCTCGGCGGTCGCCACGTGATCCGCA
ACCTGTCGAGCGGGCAGGTCGGGATGTGCGTGTTCAAGGATGGCCGCGTGTGCGAGGAGTGGGCGCTGTACCGCGACGAT
CGCTGTGTCGGCGGCGGTGCGCCGAAGCGCGTGGCGAACTGA

Upstream 100 bases:

>100_bases
GCGCCGGCGCGACAGCCTCGCGATGAGCGCCGGCCCTGCACACCGGCTGTGCAATCCCCGCTATCCTGACCGTTCCGCGA
ACGAAAACGAGGAGCGTGCA

Downstream 100 bases:

>100_bases
GTGCGGCCGGCCGATCGCGCCCCGCATCGGCCGCCGACGTGGCCGGCAGCCGGCAGGTCCGTAAGCCTCTTGTTATACTC
GGCGCCGCCCGGGGACGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSVRLVVICALALVAPGAFAQPLPPGQQPPAQVALANPASVNCEKLGGRHVIRNLSSGQVGMCVFKDGRVCEEWALYRDD
RCVGGGAPKRVAN

Sequences:

>Translated_93_residues
MSVRLVVICALALVAPGAFAQPLPPGQQPPAQVALANPASVNCEKLGGRHVIRNLSSGQVGMCVFKDGRVCEEWALYRDD
RCVGGGAPKRVAN
>Mature_92_residues
SVRLVVICALALVAPGAFAQPLPPGQQPPAQVALANPASVNCEKLGGRHVIRNLSSGQVGMCVFKDGRVCEEWALYRDDR
CVGGGAPKRVAN

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9754; Mature: 9623

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLVVICALALVAPGAFAQPLPPGQQPPAQVALANPASVNCEKLGGRHVIRNLSSGQV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCHHHHHCCCCCCE
GMCVFKDGRVCEEWALYRDDRCVGGGAPKRVAN
EEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVRLVVICALALVAPGAFAQPLPPGQQPPAQVALANPASVNCEKLGGRHVIRNLSSGQV
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCHHHHHCCCCCCE
GMCVFKDGRVCEEWALYRDDRCVGGGAPKRVAN
EEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA