| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is thlA [H]
Identifier: 107023150
GI number: 107023150
Start: 1775782
End: 1776972
Strand: Reverse
Name: thlA [H]
Synonym: Bcen_1599
Alternate gene names: 107023150
Gene position: 1776972-1775782 (Counterclockwise)
Preceding gene: 107023151
Following gene: 107023148
Centisome position: 53.94
GC content: 69.77
Gene sequence:
>1191_bases ATGACGACTCAGGATCCGATCGTAATCGTGGGCGCGGCGCGCACGCCGATGGGTGGTTTTCAGGGCGACCTGGCGGCGGC GAGCGCGAGCGACCTTGGCGCGGTGGCGATTCGCGCCGCGCTCGAGCGCGCGAACGTGCCGGCCGAACGCATCGAGGAAA TCGTGTTCGGCTGCGTGCTGCCGGCCGGCCAGGGCCAGGCGCCCGCGCGACAGGCCGCGCTGAAGGCCGGGCTGCCGCTC GCGGCGGGCGCGACCACGGTCAACAAGATGTGCGGTTCGGGGATGAAGGCGGCGATGTTCGCGCACGACCTGCTGCTGGC CGGTTCGGCGGCGGTGGCCGTGGCGGGCGGGATGGAGAGCATGACGAATGCGCCGTACCTGCTGCCGAAGGCGCGCGCGG GTATGCGCATGGGGCACGGGCAGGTGCTCGACCACATGTTCCTCGACGGGCTCGAGGACGCGTATGAAAAGGGCCGCCTG ATGGGCACCTTCGCCGAGGATTGCGCGCAGGCGTACCAGTTCACGCGCGAAGCGCAGGATGCGTTCGCGATTGCGTCGCT GACGCGGGCGCAGCGCGCGATCGCGGAAGGGCGGTTCGTGTCGGAAATCGCGCCGGTGACCGTGAAGGCCGGCAAGACGG AAAGCGTCGTGTCGATCGACGAGCAGCCCGGCAAGGCGAAACTCGACAAGATCCCGACGCTGAAGCCGGCGTTTCGCGAC GGCGGCACGGTGACGGCCGCGAACGCATCGTCGATCTCGGACGGCGCGGCCGCGCTCGTGATGATGCGCCGCTCGGAGGC CGAGCGCCTCGGCCTCACGCCGAAGGCCGTGATCGTCGGGCATGCGACTCATGCGGACAAGCCCGGCCTGTTCGCGACTG CACCGATCGGCGCGCTGCGCAAGCTGTCGGAGAAAACCGGCTGGAACCTGCGCGACGTCGACCTGTTCGAGATCAACGAA GCGTTCGCGGTGGTGCCGATGGCCGCGATGCGCGACCTCGATCTGCCGCACGAGAAGGTGAACGTGCACGGCGGCGCGTG CGCGCTCGGGCATCCGATCGGCGCATCGGGTGCGCGCGTGATGGTGACGCTGCTGGCCGCGCTCGAAACGTATGGCCTGA CGCGCGGCGTCGCATCGCTGTGCATCGGCGGCGGTGAAGCAACGGCGGTTGCGATCGAGCGCATCGCGTAA
Upstream 100 bases:
>100_bases GGTGCGCCACATCGCCGAGAACACGATGCTGAACGGCGAAGTCATCCGTCTCGATGGCGCGTTGCGCATGGCACCGCGCT GACACTGGAGGAAGCGAATC
Downstream 100 bases:
>100_bases CACTTCGCATCACGCATCACGTCGCATCGCATCGCATCGTTCGCACGGATGTGGCATCACGGGGGGCGCGTATCGCACGG GACATCCCCGTGCGGTACGC
Product: Acetyl-CoA C-acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTTQDPIVIVGAARTPMGGFQGDLAAASASDLGAVAIRAALERANVPAERIEEIVFGCVLPAGQGQAPARQAALKAGLPL AAGATTVNKMCGSGMKAAMFAHDLLLAGSAAVAVAGGMESMTNAPYLLPKARAGMRMGHGQVLDHMFLDGLEDAYEKGRL MGTFAEDCAQAYQFTREAQDAFAIASLTRAQRAIAEGRFVSEIAPVTVKAGKTESVVSIDEQPGKAKLDKIPTLKPAFRD GGTVTAANASSISDGAAALVMMRRSEAERLGLTPKAVIVGHATHADKPGLFATAPIGALRKLSEKTGWNLRDVDLFEINE AFAVVPMAAMRDLDLPHEKVNVHGGACALGHPIGASGARVMVTLLAALETYGLTRGVASLCIGGGEATAVAIERIA
Sequences:
>Translated_396_residues MTTQDPIVIVGAARTPMGGFQGDLAAASASDLGAVAIRAALERANVPAERIEEIVFGCVLPAGQGQAPARQAALKAGLPL AAGATTVNKMCGSGMKAAMFAHDLLLAGSAAVAVAGGMESMTNAPYLLPKARAGMRMGHGQVLDHMFLDGLEDAYEKGRL MGTFAEDCAQAYQFTREAQDAFAIASLTRAQRAIAEGRFVSEIAPVTVKAGKTESVVSIDEQPGKAKLDKIPTLKPAFRD GGTVTAANASSISDGAAALVMMRRSEAERLGLTPKAVIVGHATHADKPGLFATAPIGALRKLSEKTGWNLRDVDLFEINE AFAVVPMAAMRDLDLPHEKVNVHGGACALGHPIGASGARVMVTLLAALETYGLTRGVASLCIGGGEATAVAIERIA >Mature_395_residues TTQDPIVIVGAARTPMGGFQGDLAAASASDLGAVAIRAALERANVPAERIEEIVFGCVLPAGQGQAPARQAALKAGLPLA AGATTVNKMCGSGMKAAMFAHDLLLAGSAAVAVAGGMESMTNAPYLLPKARAGMRMGHGQVLDHMFLDGLEDAYEKGRLM GTFAEDCAQAYQFTREAQDAFAIASLTRAQRAIAEGRFVSEIAPVTVKAGKTESVVSIDEQPGKAKLDKIPTLKPAFRDG GTVTAANASSISDGAAALVMMRRSEAERLGLTPKAVIVGHATHADKPGLFATAPIGALRKLSEKTGWNLRDVDLFEINEA FAVVPMAAMRDLDLPHEKVNVHGGACALGHPIGASGARVMVTLLAALETYGLTRGVASLCIGGGEATAVAIERIA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=393, Percent_Identity=47.0737913486005, Blast_Score=335, Evalue=3e-92, Organism=Homo sapiens, GI4557237, Length=397, Percent_Identity=45.088161209068, Blast_Score=316, Evalue=2e-86, Organism=Homo sapiens, GI167614485, Length=392, Percent_Identity=35.7142857142857, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI4501853, Length=400, Percent_Identity=36, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI4504327, Length=424, Percent_Identity=31.3679245283019, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI194353979, Length=397, Percent_Identity=28.7153652392947, Blast_Score=115, Evalue=9e-26, Organism=Escherichia coli, GI87082165, Length=389, Percent_Identity=44.7300771208226, Blast_Score=327, Evalue=6e-91, Organism=Escherichia coli, GI1788554, Length=390, Percent_Identity=50, Blast_Score=326, Evalue=2e-90, Organism=Escherichia coli, GI1787663, Length=398, Percent_Identity=36.6834170854271, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI48994986, Length=406, Percent_Identity=36.6995073891626, Blast_Score=202, Evalue=4e-53, Organism=Escherichia coli, GI1788683, Length=402, Percent_Identity=30.3482587064677, Blast_Score=150, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17535921, Length=391, Percent_Identity=43.7340153452685, Blast_Score=292, Evalue=2e-79, Organism=Caenorhabditis elegans, GI25147385, Length=387, Percent_Identity=41.6020671834625, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI133906874, Length=390, Percent_Identity=39.2307692307692, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17535917, Length=391, Percent_Identity=35.2941176470588, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17551802, Length=424, Percent_Identity=32.5471698113208, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6325229, Length=397, Percent_Identity=47.3551637279597, Blast_Score=332, Evalue=5e-92, Organism=Saccharomyces cerevisiae, GI6322031, Length=391, Percent_Identity=32.9923273657289, Blast_Score=179, Evalue=5e-46, Organism=Drosophila melanogaster, GI24655093, Length=391, Percent_Identity=47.5703324808184, Blast_Score=353, Evalue=1e-97, Organism=Drosophila melanogaster, GI24640423, Length=391, Percent_Identity=45.7800511508951, Blast_Score=308, Evalue=4e-84, Organism=Drosophila melanogaster, GI17648125, Length=395, Percent_Identity=34.4303797468354, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI17137578, Length=422, Percent_Identity=30.8056872037915, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40809; Mature: 40677
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQDPIVIVGAARTPMGGFQGDLAAASASDLGAVAIRAALERANVPAERIEEIVFGCVL CCCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC PAGQGQAPARQAALKAGLPLAAGATTVNKMCGSGMKAAMFAHDLLLAGSAAVAVAGGMES CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEECCHHH MTNAPYLLPKARAGMRMGHGQVLDHMFLDGLEDAYEKGRLMGTFAEDCAQAYQFTREAQD HCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHH AFAIASLTRAQRAIAEGRFVSEIAPVTVKAGKTESVVSIDEQPGKAKLDKIPTLKPAFRD HHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCEEEECCCCCCCHHCCCCCCCCHHCC GGTVTAANASSISDGAAALVMMRRSEAERLGLTPKAVIVGHATHADKPGLFATAPIGALR CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCHHHHH KLSEKTGWNLRDVDLFEINEAFAVVPMAAMRDLDLPHEKVNVHGGACALGHPIGASGARV HHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCHHHEECCCCEEECCCCCCCCHHHH MVTLLAALETYGLTRGVASLCIGGGEATAVAIERIA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure TTQDPIVIVGAARTPMGGFQGDLAAASASDLGAVAIRAALERANVPAERIEEIVFGCVL CCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC PAGQGQAPARQAALKAGLPLAAGATTVNKMCGSGMKAAMFAHDLLLAGSAAVAVAGGMES CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHEEECCHHH MTNAPYLLPKARAGMRMGHGQVLDHMFLDGLEDAYEKGRLMGTFAEDCAQAYQFTREAQD HCCCCEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHH AFAIASLTRAQRAIAEGRFVSEIAPVTVKAGKTESVVSIDEQPGKAKLDKIPTLKPAFRD HHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCEEEECCCCCCCHHCCCCCCCCHHCC GGTVTAANASSISDGAAALVMMRRSEAERLGLTPKAVIVGHATHADKPGLFATAPIGALR CCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCHHHHH KLSEKTGWNLRDVDLFEINEAFAVVPMAAMRDLDLPHEKVNVHGGACALGHPIGASGARV HHHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCHHHEECCCCEEECCCCCCCCHHHH MVTLLAALETYGLTRGVASLCIGGGEATAVAIERIA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]