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The map label for this gene is amaB [H]

Identifier: 107023148

GI number: 107023148

Start: 1773353

End: 1774633

Strand: Reverse

Name: amaB [H]

Synonym: Bcen_1597

Alternate gene names: 107023148

Gene position: 1774633-1773353 (Counterclockwise)

Preceding gene: 107023150

Following gene: 107023147

Centisome position: 53.87

GC content: 68.38

Gene sequence:

>1281_bases
ATGAGCGCGGTATCGGAAACAGTGAAGCGGGCAGCTTTCGACACGTCGATCAGGGTCGACGGCAAGCGGTTGTGGGACAG
CCTGATGGAAGTCGCGAAGATCGGCGCGACGCCGAAGGGCGGCGTGTGCCGCCTCGCGCTGACCGATCTCGACAAGGCCG
GCCGCGACCTGATCGTCGGCTGGGCGAAGGCCGCCGGCTGCACGGTGACGGTCGATACGATGGGCAACGTGTTCATGCGC
CGCGCGGGCCGCGTGGCCGACGCGGCGCCGGTCGTCACGGGTTCGCACGCGGATTCGCAGCCGACCGGCGGGCGCTTCGA
CGGTATCTACGGCGTGCTCGGCGGCCTCGAGGTGATTCGCAGTCTGAACGATCACGGCATCGAGACCGAGCATCCGGTCG
AGGTCGTGATCTGGACCAATGAGGAAGGCTCGCGCTTCGCGCCCGCGATGGTCGCGTCGGGCGTGTTCGCGGGTGTGTTT
CCGCTCGAATACGGGCTGTCGCGCAAGGACGTGGACGGCAAGACGATCGGCGAGGAGCTGGCGCGCATCGGCTACGCGGG
CGACGTGCCGTGCGGCGGGCGCAAGCTGCACGCGGCGTTCGAGCTGCATATCGAACAGGGGCCGATTCTCGAAGCGGAAT
GCAAGACGATCGGCGTCGTGACCGACGCGCAGGGGCAGCGCTGGTACGAGATCACGTTCACCGGCCAAGAAGCGCACGCG
GGGCCGACGCCGATGCCGCGCCGCCGCGACGCGCTGCTCGGCGCGTCGCGCGTGGTCGATCTCGTCAACCGGATCGGCCT
TGATCACGCGCCGTTCGGCTGCGCGACGGTCGGCATGATGCAGGTCCACCCGAACTCGCGCAACGTGATTCCCGGCCGCG
TGTTCTTCACCGTCGATTTCCGTCATCCGGACGACGCCGTGCTCGCGAAGATGGATGCGGCGCTGCGCGACGGCGTCGCG
CGCATCGCGGCCGACATCGGGCTCGAAACCGAACTCGAGCAGATTTTCTACTACAAGCCGGTCGCGTTCGATCCTGAGTG
CGTGGCGGCCGTGCGCGGCGCGGCCGACCGCTTCGGCTACTCGCATCGCGACATCGTGTCGGGTGCGGGCCACGACGCGT
GCTATCTGGCGCAGGTCGCGCCGACGTCGATGGTGTTCGTGCCCTGCATCGACGGCATCAGCCACAACGAGATCGAGGAC
GCGACGCCCGCATGGATCGAGGCCGGCGCGAACGTGCTGCTGCACGCGATGTTGTCGCGCGCATGCGAGCCGGCCTCGTG
A

Upstream 100 bases:

>100_bases
GGACATGCACCGCATCCGTGCGGCGTGCCCCGAAACAGGCCTCGCACGCACCGGCACAGACCGGGCTGGCGACATCACCG
ACCCCACAGGAGCGATACGA

Downstream 100 bases:

>100_bases
CGGAGCGACCGTAGCGGCCGTGAGGCTGCATCACGTCAGATATTTGCATTCCTAAGCACGACCGCCCCGACTGTGCATCC
GCAGCCGGCGGGGACGGCTT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MSAVSETVKRAAFDTSIRVDGKRLWDSLMEVAKIGATPKGGVCRLALTDLDKAGRDLIVGWAKAAGCTVTVDTMGNVFMR
RAGRVADAAPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVF
PLEYGLSRKDVDGKTIGEELARIGYAGDVPCGGRKLHAAFELHIEQGPILEAECKTIGVVTDAQGQRWYEITFTGQEAHA
GPTPMPRRRDALLGASRVVDLVNRIGLDHAPFGCATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRDGVA
RIAADIGLETELEQIFYYKPVAFDPECVAAVRGAADRFGYSHRDIVSGAGHDACYLAQVAPTSMVFVPCIDGISHNEIED
ATPAWIEAGANVLLHAMLSRACEPAS

Sequences:

>Translated_426_residues
MSAVSETVKRAAFDTSIRVDGKRLWDSLMEVAKIGATPKGGVCRLALTDLDKAGRDLIVGWAKAAGCTVTVDTMGNVFMR
RAGRVADAAPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVF
PLEYGLSRKDVDGKTIGEELARIGYAGDVPCGGRKLHAAFELHIEQGPILEAECKTIGVVTDAQGQRWYEITFTGQEAHA
GPTPMPRRRDALLGASRVVDLVNRIGLDHAPFGCATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRDGVA
RIAADIGLETELEQIFYYKPVAFDPECVAAVRGAADRFGYSHRDIVSGAGHDACYLAQVAPTSMVFVPCIDGISHNEIED
ATPAWIEAGANVLLHAMLSRACEPAS
>Mature_425_residues
SAVSETVKRAAFDTSIRVDGKRLWDSLMEVAKIGATPKGGVCRLALTDLDKAGRDLIVGWAKAAGCTVTVDTMGNVFMRR
AGRVADAAPVVTGSHADSQPTGGRFDGIYGVLGGLEVIRSLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFP
LEYGLSRKDVDGKTIGEELARIGYAGDVPCGGRKLHAAFELHIEQGPILEAECKTIGVVTDAQGQRWYEITFTGQEAHAG
PTPMPRRRDALLGASRVVDLVNRIGLDHAPFGCATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAKMDAALRDGVAR
IAADIGLETELEQIFYYKPVAFDPECVAAVRGAADRFGYSHRDIVSGAGHDACYLAQVAPTSMVFVPCIDGISHNEIEDA
TPAWIEAGANVLLHAMLSRACEPAS

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=380, Percent_Identity=33.4210526315789, Blast_Score=185, Evalue=6e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45508; Mature: 45377

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVSETVKRAAFDTSIRVDGKRLWDSLMEVAKIGATPKGGVCRLALTDLDKAGRDLIVG
CCHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEE
WAKAAGCTVTVDTMGNVFMRRAGRVADAAPVVTGSHADSQPTGGRFDGIYGVLGGLEVIR
EECCCCCEEEEHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFPLEYGLSRKDVDGKTIGEEL
HHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ARIGYAGDVPCGGRKLHAAFELHIEQGPILEAECKTIGVVTDAQGQRWYEITFTGQEAHA
HHCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCC
GPTPMPRRRDALLGASRVVDLVNRIGLDHAPFGCATVGMMQVHPNSRNVIPGRVFFTVDF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEEEEC
RHPDDAVLAKMDAALRDGVARIAADIGLETELEQIFYYKPVAFDPECVAAVRGAADRFGY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCC
SHRDIVSGAGHDACYLAQVAPTSMVFVPCIDGISHNEIEDATPAWIEAGANVLLHAMLSR
CCHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ACEPAS
CCCCCC
>Mature Secondary Structure 
SAVSETVKRAAFDTSIRVDGKRLWDSLMEVAKIGATPKGGVCRLALTDLDKAGRDLIVG
CHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEE
WAKAAGCTVTVDTMGNVFMRRAGRVADAAPVVTGSHADSQPTGGRFDGIYGVLGGLEVIR
EECCCCCEEEEHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SLNDHGIETEHPVEVVIWTNEEGSRFAPAMVASGVFAGVFPLEYGLSRKDVDGKTIGEEL
HHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ARIGYAGDVPCGGRKLHAAFELHIEQGPILEAECKTIGVVTDAQGQRWYEITFTGQEAHA
HHCCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEEEECCCCCC
GPTPMPRRRDALLGASRVVDLVNRIGLDHAPFGCATVGMMQVHPNSRNVIPGRVFFTVDF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCCCCEEEEEEEC
RHPDDAVLAKMDAALRDGVARIAADIGLETELEQIFYYKPVAFDPECVAAVRGAADRFGY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCC
SHRDIVSGAGHDACYLAQVAPTSMVFVPCIDGISHNEIEDATPAWIEAGANVLLHAMLSR
CCHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ACEPAS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]