| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is yeiT [H]
Identifier: 107023147
GI number: 107023147
Start: 1771888
End: 1773225
Strand: Reverse
Name: yeiT [H]
Synonym: Bcen_1596
Alternate gene names: 107023147
Gene position: 1773225-1771888 (Counterclockwise)
Preceding gene: 107023148
Following gene: 107023146
Centisome position: 53.82
GC content: 70.63
Gene sequence:
>1338_bases ATGACCACCCAGCCAACCGGCGATATCGCCGCGCATCGCCTGTCGTCCACGCAACTCTCGTGCGAATTCGCCGATATCGC GCCGCTGCTCGATCCGACTGCCGCAGCGGCCGCCGCAAGCCGCTGTCATTACTGCTACGACGCGCCGTGCGTGCATGCGT GCCCGACGCAGATCGACATCCCGAGCTTCATCCGCAAGATCGGCAACGGCAATCTGAAAGGCGCGGCGACTGACATCCTG TCCGCGAATCCGCTCGGCGGGATGTGCGCACGCGTGTGCCCGACCGAGATCCTGTGTGAAGGCGCGTGCGTGCGCAACCA TCAGGATGCGCAGCCCGTCGCGATCGGCGCGCTGCAGCGGCACGCGACCGACTGGGCGATGCAGACCGGCGCGGTGCAGT TCCGGCGCGCGCCCGAGACGGGCCGCCATGTGGCGGTGGTCGGCGCGGGGCCGGCCGGGCTCGCGTGCGCGCACCGGCTC GCGCTCGCCGGGCATCGCGTCACGCTGTTCGACGCACGCCCGAAGGCCGGCGGCCTCAACGAATACGGGATCGCCGCGTA CAAGACCGTCGACGATTTCGCGCAACGCGAAGTCGAGTGGTTGCTGTCGGTGGGCGGCATCACGCTGGAAACGGGAGTGG CGCTTGGCCGCGACGTGACGCTCGACACGCTGCGCGAGCAGCACGACGCGGTATTCCTTGCGATGGGCCTCGGCGGCGTG CGTGCGCTCGCGATCGACGGCGAGCAACTGCGCGGCGTGATGAACGCGGTCGATTTCATCGAGCAGGTGCGGCAGGCCGA CACGCTCGCGAACGTGCCGGTCGGCCGGCGCGTGGTCGTGATCGGCGGCGGCAATACGGCGATCGATGCGGCGGTGCAGA GCCGCAAGCTCGGTGCGGAGCGCGTGACGATGGTGTATCGGCGCGGCGTGGACGCGATGAGCGCGACATGGGCCGAGCGC GAGTTCGCGCAGAAGAGCGGCGTCACGCTGGTCACGAACGCGAAGCCGGTGCGCATTGCGGGCACGGACGGGCAGGTGAC GGGCGTCGAATTCGAAGGCGCATCGGGCGAGCGTTTCACCGTCGACGCGGACATGGTGCTGAAGGCGATCGGCCAGACGC TGGTGCCGGACGGTGTCGAAGCCGCGCTGCTGACCGCGGACGGCACCCGTATCGCGGTGGATGCGGACGGACGCACGGCG CTGCCGGACGTATGGGCCGGCGGCGACTGCGCGGCGACGGGCGGCATCGACCTCACGGTGCAGGCCGTGCAGGACGGCAA GCGCGCGGCCGCGTCGATCGACGCGACGCTCGCGGCGCGCGACGCGAAGGCGGCCTGA
Upstream 100 bases:
>100_bases GCATCACGTCAGATATTTGCATTCCTAAGCACGACCGCCCCGACTGTGCATCCGCAGCCGGCGGGGACGGCTTTGTCTCC ACCCAGTCGAAGGAACGCGT
Downstream 100 bases:
>100_bases CCGCGCGACGCACCGCACGCACACCGAACACGACCCCATTCTCACGGAGCCGAACATGGCCGACCTTCGCTGCACCATCG CAGGCATCACTTCGCCGAAT
Product: oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MTTQPTGDIAAHRLSSTQLSCEFADIAPLLDPTAAAAAASRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDIL SANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRAPETGRHVAVVGAGPAGLACAHRL ALAGHRVTLFDARPKAGGLNEYGIAAYKTVDDFAQREVEWLLSVGGITLETGVALGRDVTLDTLREQHDAVFLAMGLGGV RALAIDGEQLRGVMNAVDFIEQVRQADTLANVPVGRRVVVIGGGNTAIDAAVQSRKLGAERVTMVYRRGVDAMSATWAER EFAQKSGVTLVTNAKPVRIAGTDGQVTGVEFEGASGERFTVDADMVLKAIGQTLVPDGVEAALLTADGTRIAVDADGRTA LPDVWAGGDCAATGGIDLTVQAVQDGKRAAASIDATLAARDAKAA
Sequences:
>Translated_445_residues MTTQPTGDIAAHRLSSTQLSCEFADIAPLLDPTAAAAAASRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDIL SANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRAPETGRHVAVVGAGPAGLACAHRL ALAGHRVTLFDARPKAGGLNEYGIAAYKTVDDFAQREVEWLLSVGGITLETGVALGRDVTLDTLREQHDAVFLAMGLGGV RALAIDGEQLRGVMNAVDFIEQVRQADTLANVPVGRRVVVIGGGNTAIDAAVQSRKLGAERVTMVYRRGVDAMSATWAER EFAQKSGVTLVTNAKPVRIAGTDGQVTGVEFEGASGERFTVDADMVLKAIGQTLVPDGVEAALLTADGTRIAVDADGRTA LPDVWAGGDCAATGGIDLTVQAVQDGKRAAASIDATLAARDAKAA >Mature_444_residues TTQPTGDIAAHRLSSTQLSCEFADIAPLLDPTAAAAAASRCHYCYDAPCVHACPTQIDIPSFIRKIGNGNLKGAATDILS ANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQRHATDWAMQTGAVQFRRAPETGRHVAVVGAGPAGLACAHRLA LAGHRVTLFDARPKAGGLNEYGIAAYKTVDDFAQREVEWLLSVGGITLETGVALGRDVTLDTLREQHDAVFLAMGLGGVR ALAIDGEQLRGVMNAVDFIEQVRQADTLANVPVGRRVVVIGGGNTAIDAAVQSRKLGAERVTMVYRRGVDAMSATWAERE FAQKSGVTLVTNAKPVRIAGTDGQVTGVEFEGASGERFTVDADMVLKAIGQTLVPDGVEAALLTADGTRIAVDADGRTAL PDVWAGGDCAATGGIDLTVQAVQDGKRAAASIDATLAARDAKAA
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=464, Percent_Identity=31.6810344827586, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI237757300, Length=86, Percent_Identity=51.1627906976744, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1788468, Length=413, Percent_Identity=34.6246973365617, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1789606, Length=446, Percent_Identity=33.1838565022422, Blast_Score=196, Evalue=2e-51, Organism=Escherichia coli, GI87082180, Length=475, Percent_Identity=33.2631578947368, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI1788811, Length=458, Percent_Identity=33.1877729257642, Blast_Score=191, Evalue=9e-50, Organism=Escherichia coli, GI1789243, Length=417, Percent_Identity=29.9760191846523, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1789463, Length=160, Percent_Identity=35, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71984108, Length=457, Percent_Identity=32.8227571115974, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17570289, Length=450, Percent_Identity=25.1111111111111, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17543860, Length=159, Percent_Identity=32.7044025157233, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320030, Length=454, Percent_Identity=28.1938325991189, Blast_Score=137, Evalue=3e-33, Organism=Drosophila melanogaster, GI24640763, Length=455, Percent_Identity=35.6043956043956, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI18858217, Length=455, Percent_Identity=35.6043956043956, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI28574881, Length=450, Percent_Identity=28.6666666666667, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24665539, Length=450, Percent_Identity=28.6666666666667, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24665547, Length=450, Percent_Identity=28.6666666666667, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24665543, Length=450, Percent_Identity=28.6666666666667, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 46255; Mature: 46124
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQPTGDIAAHRLSSTQLSCEFADIAPLLDPTAAAAAASRCHYCYDAPCVHACPTQIDI CCCCCCCHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHCCEECCCCCHHCCCCCCCH PSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQR HHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHCCHHHHHCCCHHCCCCCCCCHHHHHHHH HATDWAMQTGAVQFRRAPETGRHVAVVGAGPAGLACAHRLALAGHRVTLFDARPKAGGLN HHHHHHHHCCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC EYGIAAYKTVDDFAQREVEWLLSVGGITLETGVALGRDVTLDTLREQHDAVFLAMGLGGV CCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCEEEEEECCCCE RALAIDGEQLRGVMNAVDFIEQVRQADTLANVPVGRRVVVIGGGNTAIDAAVQSRKLGAE EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCHH RVTMVYRRGVDAMSATWAEREFAQKSGVTLVTNAKPVRIAGTDGQVTGVEFEGASGERFT HHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEEEECCCCCEEE VDADMVLKAIGQTLVPDGVEAALLTADGTRIAVDADGRTALPDVWAGGDCAATGGIDLTV ECHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCEEEE QAVQDGKRAAASIDATLAARDAKAA EEHHCCHHHHHHHHHHEECCCCCCC >Mature Secondary Structure TTQPTGDIAAHRLSSTQLSCEFADIAPLLDPTAAAAAASRCHYCYDAPCVHACPTQIDI CCCCCCHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHCCEECCCCCHHCCCCCCCH PSFIRKIGNGNLKGAATDILSANPLGGMCARVCPTEILCEGACVRNHQDAQPVAIGALQR HHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHCCHHHHHCCCHHCCCCCCCCHHHHHHHH HATDWAMQTGAVQFRRAPETGRHVAVVGAGPAGLACAHRLALAGHRVTLFDARPKAGGLN HHHHHHHHCCCEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC EYGIAAYKTVDDFAQREVEWLLSVGGITLETGVALGRDVTLDTLREQHDAVFLAMGLGGV CCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCEEEEEECCCCE RALAIDGEQLRGVMNAVDFIEQVRQADTLANVPVGRRVVVIGGGNTAIDAAVQSRKLGAE EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCHH RVTMVYRRGVDAMSATWAEREFAQKSGVTLVTNAKPVRIAGTDGQVTGVEFEGASGERFT HHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCEEEEEEECCCCCEEE VDADMVLKAIGQTLVPDGVEAALLTADGTRIAVDADGRTALPDVWAGGDCAATGGIDLTV ECHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCCCEEEE QAVQDGKRAAASIDATLAARDAKAA EEHHCCHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]