Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is 107023121

Identifier: 107023121

GI number: 107023121

Start: 1745940

End: 1746767

Strand: Reverse

Name: 107023121

Synonym: Bcen_1570

Alternate gene names: NA

Gene position: 1746767-1745940 (Counterclockwise)

Preceding gene: 107023122

Following gene: 107023120

Centisome position: 53.02

GC content: 69.32

Gene sequence:

>828_bases
ATGAAGACCAACCTTTCCCAACGTCTCACTCAAGGTGCGCTGGTGGCAGCGCTTGGCGCGTCCGTCGCGGGCTGCGGCGG
CGTGGTGACGCCCGGCGGGCAGAACGCCGGCGTGACGGGTGCGGCGGCAGGCGGCGCGAGCGCCGGCGCCGATTCGCAAC
TGCAGCGCTGCACGTCGCCGCTCGGCACGATCGCGGTCGACGACGGCCGCAACGCCGACTGGTGGGGCCAGTTCGGCAGC
GCCACCAAGGTGACGAGCATCGATCCGCTGCTGCGGCTGGCGGTGCAGCAGTCGAACTGCTTCGTGATCACGTCGATCGG
CAACCAGAAGAGCGACGCGCGCCTGTCGCGCATCACGCAGCTGCAGCGCAACTCGGGCGAATACCGGGCAGGTTCGAAGC
AGCAGAAGGGCCAGCGTGTCGCGGCCGACTACTACATGGAGCCGCAGATCGTGATCAACGATTCGCCGATCGGCGGGATC
GGCAGCATGATCGGCGGGCTGATCGGCAACAGCGCGGTGGCGGCGGTGGCGGGCCATCTGCAGACGAAGGCGTCGGTGGT
GACGTTGACGCTGTTCGACGTGCGCTCGGCGGTGCAGATCGCGGCGTCGGAAGGCAGCTCGACGGCGACCAACTACGGCG
CGGCGCTGGGCGGCTTCGGCGGCGGCGTGGGCGGCGCGCTGGCGGGCTTCTCGTCGACGCCGGAAGGCAAGGCGACGGTC
GTGGCGTTCATCGATGCGTACAACAAGATGGTCGTCGCGCTGCGCAGCTACAAGGCGCAGGACGTGAAGGGCGGGCTGGG
TCGCGGTGGCCAGTTGCAGGTGAACTGA

Upstream 100 bases:

>100_bases
CAGCCGCGGGGAGACCACCATCGCGCGCCACGCCGGGGGGCTTATCGAAGTTCGCACGGACACATAAGCCGAACAACGAC
TCTAATCGATCGACAACGAC

Downstream 100 bases:

>100_bases
CGTTGCCGGGCCGGCGGGATGCCGCCGGCCGATTCCTGATCTCTGATTCCTGATTCTTGATTCTTGATTCGTGATGGCCG
GTGCGTGCGGCGTGATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSPLGTIAVDDGRNADWWGQFGS
ATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQLQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGI
GSMIGGLIGNSAVAAVAGHLQTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV
VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN

Sequences:

>Translated_275_residues
MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSPLGTIAVDDGRNADWWGQFGS
ATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQLQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGI
GSMIGGLIGNSAVAAVAGHLQTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV
VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN
>Mature_275_residues
MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSPLGTIAVDDGRNADWWGQFGS
ATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQLQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGI
GSMIGGLIGNSAVAAVAGHLQTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV
VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27639; Mature: 27639

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSP
CCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
LGTIAVDDGRNADWWGQFGSATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQ
CCEEEECCCCCCCHHCCCCCCCEECHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
LQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGIGSMIGGLIGNSAVAAVAGHL
HHHCCCCCCCCCCHHCCCEEEHHEEECCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHH
QTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV
HCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCCHHHHHHCCCCCCCCCEEE
VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN
EEEHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEC
>Mature Secondary Structure
MKTNLSQRLTQGALVAALGASVAGCGGVVTPGGQNAGVTGAAAGGASAGADSQLQRCTSP
CCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
LGTIAVDDGRNADWWGQFGSATKVTSIDPLLRLAVQQSNCFVITSIGNQKSDARLSRITQ
CCEEEECCCCCCCHHCCCCCCCEECHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
LQRNSGEYRAGSKQQKGQRVAADYYMEPQIVINDSPIGGIGSMIGGLIGNSAVAAVAGHL
HHHCCCCCCCCCCHHCCCEEEHHEEECCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHH
QTKASVVTLTLFDVRSAVQIAASEGSSTATNYGAALGGFGGGVGGALAGFSSTPEGKATV
HCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHCHHHCCCCCCHHHHHHCCCCCCCCCEEE
VAFIDAYNKMVVALRSYKAQDVKGGLGRGGQLQVN
EEEHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA