| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023119
Identifier: 107023119
GI number: 107023119
Start: 1744992
End: 1745570
Strand: Reverse
Name: 107023119
Synonym: Bcen_1568
Alternate gene names: NA
Gene position: 1745570-1744992 (Counterclockwise)
Preceding gene: 107023120
Following gene: 107023117
Centisome position: 52.98
GC content: 65.8
Gene sequence:
>579_bases GTGCAGTTGCACATGTATACGCAAGCGACGTCGCAGAGCGCGTCGGTCGACAACGGCGTGTACACGCGGACTTACGCGCC GGCGACGTTCGACGGCGTGGCGCTCACGCAGCAGGCCGAAACCACGACAGGCTCGCCGATCCAGACCAATCACTACTACC TCGTCGGCAACGGCGTGCGCACGTACTACGGCAGCGAGGTCTACAGCGGCGGCACGCTCGCGTTGCGGGACGTGAACTCG CCGCCCTATGTCGAGACGATCGGGCTCGCGGGAAGCGAGACGGTGAACTACGTGGATACGCCCGTCGTTCCGTCAGGCGG CGCGCAAACGTCCGTCTCGATCCAGCGGACCTACGTCGCGCGCGAAACGGTCAGCCTCAGGAACGGCAAGGTCTACGCGA ACGCCTGCCACTATCAGACCACGGAGACTACCGCCAACCAGGCGGTGACGACCAAGACGAGCGCTGACGACTGGCTCGCG CCGGGCGTCGGCCTGGTCAAGTCGGTCGCCAACGTCGGCGGCACGCAGATCATCACGCGCGAACTGGAAGCAGCGACGGT GGGCGGCAAGTCGTACTAG
Upstream 100 bases:
>100_bases CAGCGGCGGAACGCCGACCACGGGCACATCCGGCGGCAATCCGGGCTCGCCGACCGCGTCGAACGTCGAGTGCGATCCGG TTTACCAGTAGGGCGATACC
Downstream 100 bases:
>100_bases GGGTCGACGCGAGATGCGCGCCGCGGATGGAGAAGTTGCGCCATCCCGCCGCGCCGTTCGCCCGACAACACGACGCGGTG GCGGACATCGATATCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQLHMYTQATSQSASVDNGVYTRTYAPATFDGVALTQQAETTTGSPIQTNHYYLVGNGVRTYYGSEVYSGGTLALRDVNS PPYVETIGLAGSETVNYVDTPVVPSGGAQTSVSIQRTYVARETVSLRNGKVYANACHYQTTETTANQAVTTKTSADDWLA PGVGLVKSVANVGGTQIITRELEAATVGGKSY
Sequences:
>Translated_192_residues MQLHMYTQATSQSASVDNGVYTRTYAPATFDGVALTQQAETTTGSPIQTNHYYLVGNGVRTYYGSEVYSGGTLALRDVNS PPYVETIGLAGSETVNYVDTPVVPSGGAQTSVSIQRTYVARETVSLRNGKVYANACHYQTTETTANQAVTTKTSADDWLA PGVGLVKSVANVGGTQIITRELEAATVGGKSY >Mature_192_residues MQLHMYTQATSQSASVDNGVYTRTYAPATFDGVALTQQAETTTGSPIQTNHYYLVGNGVRTYYGSEVYSGGTLALRDVNS PPYVETIGLAGSETVNYVDTPVVPSGGAQTSVSIQRTYVARETVSLRNGKVYANACHYQTTETTANQAVTTKTSADDWLA PGVGLVKSVANVGGTQIITRELEAATVGGKSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20309; Mature: 20309
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLHMYTQATSQSASVDNGVYTRTYAPATFDGVALTQQAETTTGSPIQTNHYYLVGNGVR CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEECCCEEEEECCEE TYYGSEVYSGGTLALRDVNSPPYVETIGLAGSETVNYVDTPVVPSGGAQTSVSIQRTYVA EEECCEEECCCEEEEEECCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEEEEEEEEEE RETVSLRNGKVYANACHYQTTETTANQAVTTKTSADDWLAPGVGLVKSVANVGGTQIITR HEEEEECCCEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE ELEAATVGGKSY EHHEEECCCCCC >Mature Secondary Structure MQLHMYTQATSQSASVDNGVYTRTYAPATFDGVALTQQAETTTGSPIQTNHYYLVGNGVR CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEECCCEEEEECCEE TYYGSEVYSGGTLALRDVNSPPYVETIGLAGSETVNYVDTPVVPSGGAQTSVSIQRTYVA EEECCEEECCCEEEEEECCCCCCEEEEECCCCCCCCEECCCCCCCCCCCEEEEEEEEEEE RETVSLRNGKVYANACHYQTTETTANQAVTTKTSADDWLAPGVGLVKSVANVGGTQIITR HEEEEECCCEEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE ELEAATVGGKSY EHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA