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The map label for this gene is 107023115

Identifier: 107023115

GI number: 107023115

Start: 1739871

End: 1740944

Strand: Reverse

Name: 107023115

Synonym: Bcen_1564

Alternate gene names: NA

Gene position: 1740944-1739871 (Counterclockwise)

Preceding gene: 107023116

Following gene: 107023114

Centisome position: 52.84

GC content: 63.69

Gene sequence:

>1074_bases
ATGAAAAAGACACGACAGGTCGTGGTGCGCGTTGCCGCCCGGCGCGTTGTCGGTACGGTCGGCGTGACGGCGATATTCAG
CGCCGGTCTGGTATTGCATTCCGTCGGGGCATACGCGGATAGCGGCTCCCAGGTCCAGCTTTATGGCCTCCTCGGCACCT
ACGTCGGCAGTATCAAACGCAGCGACACGCCGCAGGCTGCGGTACAGATGGGGAGCGGCGGGCTGACCACGTCGTTCTGG
GGAATCCGCGGCAAGGAAGACCTTGGCGGCGGCGTCGGCGCCATTTTTGTCCTCGAGAGCTTCTTTCAACCCGCAAACGG
CGCGCTGGGGCGCAGTGCGGCGGACCCGTTCTGGTCACGCAATGCGTACGTGGGCTTTCAAGGCGACTTCGGGCAGGTGA
CCTTCGGGCGACAAAGAAACCCGGCCTATACGGCTGAATCCCTCGTCAATCCGTTCGGATCCTCGACCGTCTTCTCTCCG
CTCGTCCTGCAGACGTTCGTGACCAACTATGGCGGGACGATCATCGGCGATACGGTGTGGAACAACACCGTCAAGTACAC
GACGCCCGACTTCAAGGGGTTCGCCGCCACCGTCATCTACGGTCTTGGCGGCGTGGCGGGTTCACCCGGCGTCGGTAATC
TCGGCGTTCACTTGAACTATCGAGGGCACGGTCTCACGGCCGTGCTGTCCGGCCAGCGCGTGCGGTATACCGCGGCAGGG
CCGGTCGGCGCGCAGTATGCCTATCTGGCTGGCGCGGCATACGACTTCAAGCTCGTCACGCTCTATGGCGCGTGGGCGAT
GACGAGCGATGCAAGTACGCCGACCGGCAGCCACACCTATGAGGCGGGTTTGTCGATCCCGTTGTCACCCGCCGACTTCC
TGCTTGCAGAGTGGGCGCGCACGAAGCGGTCCGGCGCTACCCGAGCGGCGAGCGGCCTGCGGAACACCGCGTCTGTCGGC
TACAACCACCTGCTGTCGAAACGGACGGACCTCTACGCGATTTACGCTTACGACAAGCTGAGCGCACACCCCATCGGCAA
CTCGTTTGCGGTGGGCATTCGCCACACGTTCTGA

Upstream 100 bases:

>100_bases
TGCTCGAAACAAGGGCCGCCGTTCCCGCTATTCAATCAGTACTACAGATGGATGGACACGGAAAAGGCCGCTCACAAAAA
TATGAATGGAGACAATCGAA

Downstream 100 bases:

>100_bases
TTCCCTCCCGCACCCTTCCACACCCCGCAGCGGTAAATCCTTCCCTGAACGGAAGGTCGCGTTTATGATCCGCCATGCAA
GCGGTGGTCGCTGGAACCGT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKKTRQVVVRVAARRVVGTVGVTAIFSAGLVLHSVGAYADSGSQVQLYGLLGTYVGSIKRSDTPQAAVQMGSGGLTTSFW
GIRGKEDLGGGVGAIFVLESFFQPANGALGRSAADPFWSRNAYVGFQGDFGQVTFGRQRNPAYTAESLVNPFGSSTVFSP
LVLQTFVTNYGGTIIGDTVWNNTVKYTTPDFKGFAATVIYGLGGVAGSPGVGNLGVHLNYRGHGLTAVLSGQRVRYTAAG
PVGAQYAYLAGAAYDFKLVTLYGAWAMTSDASTPTGSHTYEAGLSIPLSPADFLLAEWARTKRSGATRAASGLRNTASVG
YNHLLSKRTDLYAIYAYDKLSAHPIGNSFAVGIRHTF

Sequences:

>Translated_357_residues
MKKTRQVVVRVAARRVVGTVGVTAIFSAGLVLHSVGAYADSGSQVQLYGLLGTYVGSIKRSDTPQAAVQMGSGGLTTSFW
GIRGKEDLGGGVGAIFVLESFFQPANGALGRSAADPFWSRNAYVGFQGDFGQVTFGRQRNPAYTAESLVNPFGSSTVFSP
LVLQTFVTNYGGTIIGDTVWNNTVKYTTPDFKGFAATVIYGLGGVAGSPGVGNLGVHLNYRGHGLTAVLSGQRVRYTAAG
PVGAQYAYLAGAAYDFKLVTLYGAWAMTSDASTPTGSHTYEAGLSIPLSPADFLLAEWARTKRSGATRAASGLRNTASVG
YNHLLSKRTDLYAIYAYDKLSAHPIGNSFAVGIRHTF
>Mature_357_residues
MKKTRQVVVRVAARRVVGTVGVTAIFSAGLVLHSVGAYADSGSQVQLYGLLGTYVGSIKRSDTPQAAVQMGSGGLTTSFW
GIRGKEDLGGGVGAIFVLESFFQPANGALGRSAADPFWSRNAYVGFQGDFGQVTFGRQRNPAYTAESLVNPFGSSTVFSP
LVLQTFVTNYGGTIIGDTVWNNTVKYTTPDFKGFAATVIYGLGGVAGSPGVGNLGVHLNYRGHGLTAVLSGQRVRYTAAG
PVGAQYAYLAGAAYDFKLVTLYGAWAMTSDASTPTGSHTYEAGLSIPLSPADFLLAEWARTKRSGATRAASGLRNTASVG
YNHLLSKRTDLYAIYAYDKLSAHPIGNSFAVGIRHTF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37548; Mature: 37548

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTRQVVVRVAARRVVGTVGVTAIFSAGLVLHSVGAYADSGSQVQLYGLLGTYVGSIKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCC
SDTPQAAVQMGSGGLTTSFWGIRGKEDLGGGVGAIFVLESFFQPANGALGRSAADPFWSR
CCCCHHHHEECCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NAYVGFQGDFGQVTFGRQRNPAYTAESLVNPFGSSTVFSPLVLQTFVTNYGGTIIGDTVW
CEEEEECCCCCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECHHC
NNTVKYTTPDFKGFAATVIYGLGGVAGSPGVGNLGVHLNYRGHGLTAVLSGQRVRYTAAG
CCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEECC
PVGAQYAYLAGAAYDFKLVTLYGAWAMTSDASTPTGSHTYEAGLSIPLSPADFLLAEWAR
CCCCCCHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH
TKRSGATRAASGLRNTASVGYNHLLSKRTDLYAIYAYDKLSAHPIGNSFAVGIRHTF
HHHCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKTRQVVVRVAARRVVGTVGVTAIFSAGLVLHSVGAYADSGSQVQLYGLLGTYVGSIKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCC
SDTPQAAVQMGSGGLTTSFWGIRGKEDLGGGVGAIFVLESFFQPANGALGRSAADPFWSR
CCCCHHHHEECCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NAYVGFQGDFGQVTFGRQRNPAYTAESLVNPFGSSTVFSPLVLQTFVTNYGGTIIGDTVW
CEEEEECCCCCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECHHC
NNTVKYTTPDFKGFAATVIYGLGGVAGSPGVGNLGVHLNYRGHGLTAVLSGQRVRYTAAG
CCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEECC
PVGAQYAYLAGAAYDFKLVTLYGAWAMTSDASTPTGSHTYEAGLSIPLSPADFLLAEWAR
CCCCCCHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHH
TKRSGATRAASGLRNTASVGYNHLLSKRTDLYAIYAYDKLSAHPIGNSFAVGIRHTF
HHHCCCHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]