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The map label for this gene is yclJ [H]

Identifier: 107023112

GI number: 107023112

Start: 1736666

End: 1737385

Strand: Reverse

Name: yclJ [H]

Synonym: Bcen_1561

Alternate gene names: 107023112

Gene position: 1737385-1736666 (Counterclockwise)

Preceding gene: 107023113

Following gene: 107023111

Centisome position: 52.73

GC content: 67.92

Gene sequence:

>720_bases
ATGGACCAACCGAAACGCATCCTGATCGTCGAGGACGACGCCGACATCGCCGACGTGCTGAGCCTGCACCTGCGCGACGA
GCGCTACGAGGTCGTGCACAGCGCGGACGGCGCCGAAGGGTTGCGCCTGCTCGAACAGGGCAACTGGGACGCGCTGATCC
TCGACCTGATGCTGCCGGGCGTCGACGGCCTCGAAATCTGCCGGCGGGCGCGGGCGATGACGCGCTATACGCCGATCATC
ATCACGAGCGCGCGGTCGAGCGAGGTGCATCGAATCCTCGGCCTCGAACTCGGCGCCGACGACTACCTCGCGAAACCGTT
CTCGGTGCTCGAACTTGTCGCGCGCGTGAAGGCGCTGCTGCGGCGCGTCGATGCGCTCGCACGCGATTCGCGGATCGACG
CGGGCACGCTCGACGTCGCGGGGCTGGCGATCGATCCGATCGCACGCGAGGCGAGCGTCGACGGCGCACGCCTCGACCTG
ACGCCGCGCGAATTCGACCTGCTGTATTTCTTCGCGCGGCACCCAGGCAAGGTGTTCTCGCGGATGGACCTGCTGAACGC
TGTGTGGGGCTATCAGCACGAAGGCTACGAACATACGGTCAACACCCACATCAACCGGCTGCGCGCGAAGATCGAGGCCG
ATCCGGCCGAGCCGGTGCGCATCCTCACCGTGTGGGGGCGCGGCTACAAGCTCGCCGCGCCGGGCCAGCGGGACGCGTGA

Upstream 100 bases:

>100_bases
CAATGACGGCAGCGCGGCTTTCCGTCGCGATTCGACCCGGGCCGCCCGCCCGCCGATCACCGTTACCGAGCCCCGCTCCG
ACGTGCCGCCGCCCACCGCC

Downstream 100 bases:

>100_bases
TGAAGCTCACGCTCACCCGGCGACTGTCGCTCGTGTTCTCGATCCTGCTGATCGCGTGCTCGGGCGCGTCGGCATGGCTG
CAGATCCGTGCGAACGACAT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MDQPKRILIVEDDADIADVLSLHLRDERYEVVHSADGAEGLRLLEQGNWDALILDLMLPGVDGLEICRRARAMTRYTPII
ITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALLRRVDALARDSRIDAGTLDVAGLAIDPIAREASVDGARLDL
TPREFDLLYFFARHPGKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGRGYKLAAPGQRDA

Sequences:

>Translated_239_residues
MDQPKRILIVEDDADIADVLSLHLRDERYEVVHSADGAEGLRLLEQGNWDALILDLMLPGVDGLEICRRARAMTRYTPII
ITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALLRRVDALARDSRIDAGTLDVAGLAIDPIAREASVDGARLDL
TPREFDLLYFFARHPGKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGRGYKLAAPGQRDA
>Mature_239_residues
MDQPKRILIVEDDADIADVLSLHLRDERYEVVHSADGAEGLRLLEQGNWDALILDLMLPGVDGLEICRRARAMTRYTPII
ITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALLRRVDALARDSRIDAGTLDVAGLAIDPIAREASVDGARLDL
TPREFDLLYFFARHPGKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGRGYKLAAPGQRDA

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=238, Percent_Identity=36.9747899159664, Blast_Score=160, Evalue=5e-41,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=40.0862068965517, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=37.2294372294372, Blast_Score=156, Evalue=9e-40,
Organism=Escherichia coli, GI1788394, Length=232, Percent_Identity=41.8103448275862, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=36.8421052631579, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1790860, Length=229, Percent_Identity=38.8646288209607, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=40.2597402597403, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=37.0044052863436, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=34.1880341880342, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=36, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790552, Length=230, Percent_Identity=36.9565217391304, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=33.6170212765957, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=36.7521367521368, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=33.4821428571429, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1790576, Length=92, Percent_Identity=41.304347826087, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26740; Mature: 26740

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQPKRILIVEDDADIADVLSLHLRDERYEVVHSADGAEGLRLLEQGNWDALILDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCEEEEEHHCCC
VDGLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALL
CCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEEECCCHHHHCHHHHHHHHHHHHHHH
RRVDALARDSRIDAGTLDVAGLAIDPIAREASVDGARLDLTPREFDLLYFFARHPGKVFS
HHHHHHHHCCCCCCCCEEECCEEECCHHHHCCCCCCEEECCCCHHHEEEEECCCCHHHHH
RMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGRGYKLAAPGQRDA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCC
>Mature Secondary Structure
MDQPKRILIVEDDADIADVLSLHLRDERYEVVHSADGAEGLRLLEQGNWDALILDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCEEEEEHHCCC
VDGLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALL
CCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHEEECCCHHHHCHHHHHHHHHHHHHHH
RRVDALARDSRIDAGTLDVAGLAIDPIAREASVDGARLDLTPREFDLLYFFARHPGKVFS
HHHHHHHHCCCCCCCCEEECCEEECCHHHHCCCCCCEEECCCCHHHEEEEECCCCHHHHH
RMDLLNAVWGYQHEGYEHTVNTHINRLRAKIEADPAEPVRILTVWGRGYKLAAPGQRDA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]