| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is putP [C]
Identifier: 107023084
GI number: 107023084
Start: 1705312
End: 1706730
Strand: Reverse
Name: putP [C]
Synonym: Bcen_1533
Alternate gene names: 107023084
Gene position: 1706730-1705312 (Counterclockwise)
Preceding gene: 107023085
Following gene: 107023083
Centisome position: 51.8
GC content: 64.2
Gene sequence:
>1419_bases ATGGCCACCTTCAGTTATTGGGATACCGCCACCATCATCGGGATGGTGGTTGCCTACATCGTGGTGACGAGCGTGGTTAG TATCCGGCTGCGCAGCCGCAATTCCGAACAGTTCATGGTGGCCGGGCGTTCGATGCCGGCGCTGGTGGTCGCGATCCTGC TGATGTCGGAATTCATCGGCGCGAAATCGACCGTCGGCACGTCGCAGGAGGCGTTCTCGGCCGGCATCGCCGCGTCGTGG TCGGTGCTCGCGGCCGCCATCGGTTTCCTGCTCTTCGGCCTGTTCATGGCCCGGCGCCTGTACGCATCCGGTGAATTCAC GATCTCCGGATTCATCGCGCAGCGATACGGGCACGGTGCGAAGCTCGCCGTTTCCGCGATCATGATCTATGCGCTGTTTG TCGTGAACGTCGGCAACTACGTGAGCGGCGCGGCGGCGATCTCGACGGTCATGCGCATCAACCTGCCGACGGCCGCCGTC ATCACCGCGATCGTCAGCACGATCTATTTCGTGTGGGGCGGCCTCAAGAGCGTCGCATACCTGACGGTCGTGCACAGCGC CGTGAAGCTGCTCGGCATCGCCATTCTGGTCGGCGTCGCGTGGAAGCTGTCGGGCGGTATCGCGCCGATGGCACGGAGCC TGCCCGCGCACTACTTCACGTGGTCCGGTGCGCTGTCGGGCGGCACGATCGGCGCATGGATCATCGGCACGGCCGGGGCG ATCTTCTCGACGCAGTTCATCATCCAGGCGATCTCGGCCACCCGCAGCCCCGAGGGGGCGCGTGCATCGTCGCTGATCGC CGCGTTCCTGTGCGTGCCGATCGCGCTCGCGCTCGGCTTCATCGGCGTGGCGGCCAAGTACCTGTATCCCGGCGTCAAGA GCCTGTACGCGCTGCCCGTCTTCCTGCAGCACATGAATCCAATCCTGGCCGGCATCGTCACGACGTCGCTCGTGGCATCG ATCTTCGTCAGCGTATGCACCGTCGCACTGGCGATCGCGTCGCTGATCGTGAAGGACTTCTATGTGCCGCGTTTCAATCC GACGCCCGACGTCGAACTGAGAATGACGCGCTGGATCTCGCTGATCGTCGGCTTCCTGCCGCTGATCTTCGTGCTGTTCG TCCCGCAGATCCTCGCGCTGTCGTTCTTCAGTCGCGCGCTGCGGCTGTCCGTGTCGGTCGTCGCGCTGATCGGCATCTAT CTGCCGTTCTTCAGCGGCAAGCGCGGTGCCGTGTCGGCCCTCGTCGTCGCGACGCTCGCCACGACGTTCTGGTACCTGCT CGGCAACCCGTTCGGCATCGACAACATGTACGTCGCACTCGTGACGCCGGCCATCGTGCTGGTGATCGGCAAGCTGCTGT TTCATGGCGATGGCGCGAACCTTCGCGACAAGCCGCTCACGCATCGCGAATCGCACTGA
Upstream 100 bases:
>100_bases CGCAACGACACGCAGCACCGTCGAGCGATACCGGCAGGCACAGGCCGGATCGCTCGACGCATCGAACGCACATCAACCGA AGGTAACGTGGAGACAAGCG
Downstream 100 bases:
>100_bases CGTCGCCCACCCAGAGAGATTTCATGAGCACGAACCTCGTTGAAGCGGCCAGCGCCGCGTCCGATCATTGCGTTCGCACG GCCTATGCCGACGCGGAACG
Product: Na+/solute symporter
Products: NA
Alternate protein names: Sodium/Solute Symporter; SSS Family Solute/Sodium Symporter; SodiumSolute Symport Protein; Sodium-Solute Symporter; SodiumSolute Symporter Family Protein; Na+/Proline Symporter; Transporter SoluteSodium Symporter Family Protein; Na+ Symporter; Proline Symporter; SoluteNa+ Symporter; Proline Permease; Symporter; SSS Family SoluteSodium Symporter; Na+ Solute Symporter; SodiumSolute Symporter
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MATFSYWDTATIIGMVVAYIVVTSVVSIRLRSRNSEQFMVAGRSMPALVVAILLMSEFIGAKSTVGTSQEAFSAGIAASW SVLAAAIGFLLFGLFMARRLYASGEFTISGFIAQRYGHGAKLAVSAIMIYALFVVNVGNYVSGAAAISTVMRINLPTAAV ITAIVSTIYFVWGGLKSVAYLTVVHSAVKLLGIAILVGVAWKLSGGIAPMARSLPAHYFTWSGALSGGTIGAWIIGTAGA IFSTQFIIQAISATRSPEGARASSLIAAFLCVPIALALGFIGVAAKYLYPGVKSLYALPVFLQHMNPILAGIVTTSLVAS IFVSVCTVALAIASLIVKDFYVPRFNPTPDVELRMTRWISLIVGFLPLIFVLFVPQILALSFFSRALRLSVSVVALIGIY LPFFSGKRGAVSALVVATLATTFWYLLGNPFGIDNMYVALVTPAIVLVIGKLLFHGDGANLRDKPLTHRESH
Sequences:
>Translated_472_residues MATFSYWDTATIIGMVVAYIVVTSVVSIRLRSRNSEQFMVAGRSMPALVVAILLMSEFIGAKSTVGTSQEAFSAGIAASW SVLAAAIGFLLFGLFMARRLYASGEFTISGFIAQRYGHGAKLAVSAIMIYALFVVNVGNYVSGAAAISTVMRINLPTAAV ITAIVSTIYFVWGGLKSVAYLTVVHSAVKLLGIAILVGVAWKLSGGIAPMARSLPAHYFTWSGALSGGTIGAWIIGTAGA IFSTQFIIQAISATRSPEGARASSLIAAFLCVPIALALGFIGVAAKYLYPGVKSLYALPVFLQHMNPILAGIVTTSLVAS IFVSVCTVALAIASLIVKDFYVPRFNPTPDVELRMTRWISLIVGFLPLIFVLFVPQILALSFFSRALRLSVSVVALIGIY LPFFSGKRGAVSALVVATLATTFWYLLGNPFGIDNMYVALVTPAIVLVIGKLLFHGDGANLRDKPLTHRESH >Mature_471_residues ATFSYWDTATIIGMVVAYIVVTSVVSIRLRSRNSEQFMVAGRSMPALVVAILLMSEFIGAKSTVGTSQEAFSAGIAASWS VLAAAIGFLLFGLFMARRLYASGEFTISGFIAQRYGHGAKLAVSAIMIYALFVVNVGNYVSGAAAISTVMRINLPTAAVI TAIVSTIYFVWGGLKSVAYLTVVHSAVKLLGIAILVGVAWKLSGGIAPMARSLPAHYFTWSGALSGGTIGAWIIGTAGAI FSTQFIIQAISATRSPEGARASSLIAAFLCVPIALALGFIGVAAKYLYPGVKSLYALPVFLQHMNPILAGIVTTSLVASI FVSVCTVALAIASLIVKDFYVPRFNPTPDVELRMTRWISLIVGFLPLIFVLFVPQILALSFFSRALRLSVSVVALIGIYL PFFSGKRGAVSALVVATLATTFWYLLGNPFGIDNMYVALVTPAIVLVIGKLLFHGDGANLRDKPLTHRESH
Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular L-Proline. This Protein Is Also Capable Of Using Lithium As The Transport Cation. [C]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11141885, Length=350, Percent_Identity=24.5714285714286, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50112; Mature: 49981
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFSYWDTATIIGMVVAYIVVTSVVSIRLRSRNSEQFMVAGRSMPALVVAILLMSEFIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHC AKSTVGTSQEAFSAGIAASWSVLAAAIGFLLFGLFMARRLYASGEFTISGFIAQRYGHGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCH KLAVSAIMIYALFVVNVGNYVSGAAAISTVMRINLPTAAVITAIVSTIYFVWGGLKSVAY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LTVVHSAVKLLGIAILVGVAWKLSGGIAPMARSLPAHYFTWSGALSGGTIGAWIIGTAGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHH IFSTQFIIQAISATRSPEGARASSLIAAFLCVPIALALGFIGVAAKYLYPGVKSLYALPV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FLQHMNPILAGIVTTSLVASIFVSVCTVALAIASLIVKDFYVPRFNPTPDVELRMTRWIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LIVGFLPLIFVLFVPQILALSFFSRALRLSVSVVALIGIYLPFFSGKRGAVSALVVATLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TTFWYLLGNPFGIDNMYVALVTPAIVLVIGKLLFHGDGANLRDKPLTHRESH HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATFSYWDTATIIGMVVAYIVVTSVVSIRLRSRNSEQFMVAGRSMPALVVAILLMSEFIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHC AKSTVGTSQEAFSAGIAASWSVLAAAIGFLLFGLFMARRLYASGEFTISGFIAQRYGHGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCH KLAVSAIMIYALFVVNVGNYVSGAAAISTVMRINLPTAAVITAIVSTIYFVWGGLKSVAY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LTVVHSAVKLLGIAILVGVAWKLSGGIAPMARSLPAHYFTWSGALSGGTIGAWIIGTAGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHH IFSTQFIIQAISATRSPEGARASSLIAAFLCVPIALALGFIGVAAKYLYPGVKSLYALPV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FLQHMNPILAGIVTTSLVASIFVSVCTVALAIASLIVKDFYVPRFNPTPDVELRMTRWIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LIVGFLPLIFVLFVPQILALSFFSRALRLSVSVVALIGIYLPFFSGKRGAVSALVVATLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TTFWYLLGNPFGIDNMYVALVTPAIVLVIGKLLFHGDGANLRDKPLTHRESH HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA