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The map label for this gene is ugpA [C]

Identifier: 107023076

GI number: 107023076

Start: 1695463

End: 1696422

Strand: Reverse

Name: ugpA [C]

Synonym: Bcen_1525

Alternate gene names: 107023076

Gene position: 1696422-1695463 (Counterclockwise)

Preceding gene: 107023078

Following gene: 107023075

Centisome position: 51.49

GC content: 61.56

Gene sequence:

>960_bases
ATGAAAGCAGAAACCACACGGAGATTCGAGATGTCTTTTTCCCCAGGAGGCGGCATCCATGCCGGAGCGCCCGGGCAGCG
GCGACGCTGGCTGCGCGCGAGCCCCGCAGCCCTTACGCTGGCGCCGAGTGTCGTCGTACTTTTGATTGCCGTCTATGTGT
TCATCGGCTGGTCGATCGTCATCTCGTTCACCAGTTCGAAGTTCGCGCCGAACTACGACTTCGTCGGTCTTGCGCAGTAT
GCAAGGCTATGGGATTCGGATCGATGGAATGTCGCGGTAACGAACCTCGGTTTGTTCTCGATCGCGTTCATGCTGATCTC
GCTCGTGCTCGGCCTGCTGCTCGCGATTTTTCTCGACCAGAAGGTGCGGGGCGAGGGGGCGTTCCGGATGATCTATCTGT
ATCCGATGGCCGTGTCGTTGATCGTGACCGGCACCGCGTGGAAGTGGATCCTGAATCCCGGCCTCGGGCTGGAAAAGCTG
CTGCAGGATCTCGGCATCACCGGCATCCATGTCAACTGGCTGATCGACCCGCAGATGGCGGTCTATACGCTTGTCGTCGC
CGCCGTCTGGCAAACCGCGGGCTTCGTGATGGCGATCTTCCTGGCGGGCCTGCGCGGGATCGACGGCGAAATCATCAAGG
CGGCGCGCATGGAGGGCGCCGGCACGCTGCGCATCTATCTGACCATCATCATCCCGATGCTGCGCGCGTCCGTATTCAGC
GTGGTCGTGATCCTGATCTACCAGGCGGTGCGGTCGTTCGACCTTGTCGTGGCGCTGACGAACGGCGGCCCGGGTTTCTC
GAGCGACCTGCCGACGACGTTCATGTACAACCTGACGTTCAGCCGCGGCCAGCTCGCGCAGGGCGCCGCCAGCTCCGTCA
TGATCCTGCTCGTCGTGGTCGCCCTTACCGTCCCGTATCTCTACTCGGAGTTCAAGCGTGAACACAACGACAGTCTCTGA

Upstream 100 bases:

>100_bases
CCCGACACGGTCGTGCACGGAACGAGCGGCACCATCCGGGCATGACGCGCCGCGGTGATGCCGCAAGCATCGCGTGACCG
TATCAGGAGAGGGGGAGCGC

Downstream 100 bases:

>100_bases
CACGGCCCGGCACGTGCGTCGCGTGTCCCGCCCGTCGAGCACGACGCTGCGTGTGGTCGCGCGTGCGGTGCTCTATGCGA
TTCTCGTCGGCAGCGCGGCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKAETTRRFEMSFSPGGGIHAGAPGQRRRWLRASPAALTLAPSVVVLLIAVYVFIGWSIVISFTSSKFAPNYDFVGLAQY
ARLWDSDRWNVAVTNLGLFSIAFMLISLVLGLLLAIFLDQKVRGEGAFRMIYLYPMAVSLIVTGTAWKWILNPGLGLEKL
LQDLGITGIHVNWLIDPQMAVYTLVVAAVWQTAGFVMAIFLAGLRGIDGEIIKAARMEGAGTLRIYLTIIIPMLRASVFS
VVVILIYQAVRSFDLVVALTNGGPGFSSDLPTTFMYNLTFSRGQLAQGAASSVMILLVVVALTVPYLYSEFKREHNDSL

Sequences:

>Translated_319_residues
MKAETTRRFEMSFSPGGGIHAGAPGQRRRWLRASPAALTLAPSVVVLLIAVYVFIGWSIVISFTSSKFAPNYDFVGLAQY
ARLWDSDRWNVAVTNLGLFSIAFMLISLVLGLLLAIFLDQKVRGEGAFRMIYLYPMAVSLIVTGTAWKWILNPGLGLEKL
LQDLGITGIHVNWLIDPQMAVYTLVVAAVWQTAGFVMAIFLAGLRGIDGEIIKAARMEGAGTLRIYLTIIIPMLRASVFS
VVVILIYQAVRSFDLVVALTNGGPGFSSDLPTTFMYNLTFSRGQLAQGAASSVMILLVVVALTVPYLYSEFKREHNDSL
>Mature_319_residues
MKAETTRRFEMSFSPGGGIHAGAPGQRRRWLRASPAALTLAPSVVVLLIAVYVFIGWSIVISFTSSKFAPNYDFVGLAQY
ARLWDSDRWNVAVTNLGLFSIAFMLISLVLGLLLAIFLDQKVRGEGAFRMIYLYPMAVSLIVTGTAWKWILNPGLGLEKL
LQDLGITGIHVNWLIDPQMAVYTLVVAAVWQTAGFVMAIFLAGLRGIDGEIIKAARMEGAGTLRIYLTIIIPMLRASVFS
VVVILIYQAVRSFDLVVALTNGGPGFSSDLPTTFMYNLTFSRGQLAQGAASSVMILLVVVALTVPYLYSEFKREHNDSL

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=302, Percent_Identity=28.1456953642384, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790465, Length=220, Percent_Identity=24.0909090909091, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787570, Length=261, Percent_Identity=25.6704980842912, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34950; Mature: 34950

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAETTRRFEMSFSPGGGIHAGAPGQRRRWLRASPAALTLAPSVVVLLIAVYVFIGWSIV
CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHE
ISFTSSKFAPNYDFVGLAQYARLWDSDRWNVAVTNLGLFSIAFMLISLVLGLLLAIFLDQ
EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
KVRGEGAFRMIYLYPMAVSLIVTGTAWKWILNPGLGLEKLLQDLGITGIHVNWLIDPQMA
HHCCCCCEEEEEHHHHHHHHHEECCCEEEEECCCCCHHHHHHHCCCCEEEEEEEECCHHH
VYTLVVAAVWQTAGFVMAIFLAGLRGIDGEIIKAARMEGAGTLRIYLTIIIPMLRASVFS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VVVILIYQAVRSFDLVVALTNGGPGFSSDLPTTFMYNLTFSRGQLAQGAASSVMILLVVV
HHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
ALTVPYLYSEFKREHNDSL
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKAETTRRFEMSFSPGGGIHAGAPGQRRRWLRASPAALTLAPSVVVLLIAVYVFIGWSIV
CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHE
ISFTSSKFAPNYDFVGLAQYARLWDSDRWNVAVTNLGLFSIAFMLISLVLGLLLAIFLDQ
EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
KVRGEGAFRMIYLYPMAVSLIVTGTAWKWILNPGLGLEKLLQDLGITGIHVNWLIDPQMA
HHCCCCCEEEEEHHHHHHHHHEECCCEEEEECCCCCHHHHHHHCCCCEEEEEEEECCHHH
VYTLVVAAVWQTAGFVMAIFLAGLRGIDGEIIKAARMEGAGTLRIYLTIIIPMLRASVFS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VVVILIYQAVRSFDLVVALTNGGPGFSSDLPTTFMYNLTFSRGQLAQGAASSVMILLVVV
HHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
ALTVPYLYSEFKREHNDSL
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]