| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023028
Identifier: 107023028
GI number: 107023028
Start: 1637901
End: 1638575
Strand: Reverse
Name: 107023028
Synonym: Bcen_1476
Alternate gene names: NA
Gene position: 1638575-1637901 (Counterclockwise)
Preceding gene: 107023029
Following gene: 107023021
Centisome position: 49.74
GC content: 72.44
Gene sequence:
>675_bases ATGAATGCTGCGCACCCGCGCGCATCGGCCACCGGCGACGAAGTGGCCGGCGTGCGCATTCCGCGCACGCCCGTGACGGT CGAAGCCGCCGACGCGGCCCGCGCGTCGTTGCCCGCCGCGCTCGCCGCTCATGCGGCGCGCGTGTTCGTGTTCGCGTCGC TCGCCGCGCGGCGTGCAGGCGACGCGTGCGACGCCGACGCACTGTACGTCGCCGCGATGTACGCGAACATGGGATTGAGC CCGGCGTACTGTCGTTCGACCGAACGCTACGAGCTCGACGGCGCGGACGCCGCGCACGCGCTGCTGCTGCGGCATCGCCG GTCGCGGCGCATGCGCGACGACGTGTGGCACGCGGTCGCGCTGCATACGACACCGGGCGTGGCCGCCCGCGCGTCGCCGC TTGCGCGCGCACTGGCGTGCGCCGTGTCGACGGACCTGATGGCGACCGACTTCGACGCGTATACCGCCGACGAACGCGCG GCGCTGCTCGCGGCTTACCCGCGCGGCAGCGGTTTTCGCGAAGCGTATCTGGACATGGTCGCGCGCGGCGTCGAGCATCG GCCGCAGTCGACCTTCGGCACCTGGAGCGCGGACGTGCTCGAACGCGCGGACCCTGACTTTCATCGGCCGAATTTCTGCG GCCGCGTGCTGGGCGCGCGGTGGAACGATACGTGA
Upstream 100 bases:
>100_bases GTTTTGAGCGGCGCGTGCCGGTGCGCGACGCGCTGCGCGCCGGGTGTCGCCGTGCATCGAACGATTTTCCGCCCCGTGCA CGGGGCATGAAGGAGACAGG
Downstream 100 bases:
>100_bases CGGCGCCGGCCCGGCGTGCGGCAGCCGGCCGCACGGCCGGCCGCGGCGCGCCGCCGCGCCCGGCGTGCGCGGGTCAGGCG GGCGATTGCGCCGCGTCGTG
Product: metal-dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Cyanamide Hydratase; HD Domain-Containing; Sensory Box HD Domain-Containing Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNAAHPRASATGDEVAGVRIPRTPVTVEAADAARASLPAALAAHAARVFVFASLAARRAGDACDADALYVAAMYANMGLS PAYCRSTERYELDGADAAHALLLRHRRSRRMRDDVWHAVALHTTPGVAARASPLARALACAVSTDLMATDFDAYTADERA ALLAAYPRGSGFREAYLDMVARGVEHRPQSTFGTWSADVLERADPDFHRPNFCGRVLGARWNDT
Sequences:
>Translated_224_residues MNAAHPRASATGDEVAGVRIPRTPVTVEAADAARASLPAALAAHAARVFVFASLAARRAGDACDADALYVAAMYANMGLS PAYCRSTERYELDGADAAHALLLRHRRSRRMRDDVWHAVALHTTPGVAARASPLARALACAVSTDLMATDFDAYTADERA ALLAAYPRGSGFREAYLDMVARGVEHRPQSTFGTWSADVLERADPDFHRPNFCGRVLGARWNDT >Mature_224_residues MNAAHPRASATGDEVAGVRIPRTPVTVEAADAARASLPAALAAHAARVFVFASLAARRAGDACDADALYVAAMYANMGLS PAYCRSTERYELDGADAAHALLLRHRRSRRMRDDVWHAVALHTTPGVAARASPLARALACAVSTDLMATDFDAYTADERA ALLAAYPRGSGFREAYLDMVARGVEHRPQSTFGTWSADVLERADPDFHRPNFCGRVLGARWNDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24053; Mature: 24053
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAHPRASATGDEVAGVRIPRTPVTVEAADAARASLPAALAAHAARVFVFASLAARRAG CCCCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DACDADALYVAAMYANMGLSPAYCRSTERYELDGADAAHALLLRHRRSRRMRDDVWHAVA CCCCCHHHHHHHHHHHCCCCHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHE LHTTPGVAARASPLARALACAVSTDLMATDFDAYTADERAALLAAYPRGSGFREAYLDMV EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCHHHHHHHHH ARGVEHRPQSTFGTWSADVLERADPDFHRPNFCGRVLGARWNDT HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MNAAHPRASATGDEVAGVRIPRTPVTVEAADAARASLPAALAAHAARVFVFASLAARRAG CCCCCCCCCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DACDADALYVAAMYANMGLSPAYCRSTERYELDGADAAHALLLRHRRSRRMRDDVWHAVA CCCCCHHHHHHHHHHHCCCCHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHE LHTTPGVAARASPLARALACAVSTDLMATDFDAYTADERAALLAAYPRGSGFREAYLDMV EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCHHHHHHHHH ARGVEHRPQSTFGTWSADVLERADPDFHRPNFCGRVLGARWNDT HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA