| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023016
Identifier: 107023016
GI number: 107023016
Start: 1622040
End: 1622471
Strand: Reverse
Name: 107023016
Synonym: Bcen_1464
Alternate gene names: NA
Gene position: 1622471-1622040 (Counterclockwise)
Preceding gene: 107023018
Following gene: 107023015
Centisome position: 49.25
GC content: 71.53
Gene sequence:
>432_bases ATGGACGCCTTCAATCGCTGGGAGCACATGATCACGTCGCTCGGACCGCTATCTGCCACGGGCGTCCGGATGCCGCCGCT GCCGCGCACGCGAGAGGCGGACGGCTCGCGTCGCCCGCATCGGGACGATGCGCCGGTGCCGTCGAGCGGCGACGTGCGCC GCCGCAGCGCGATCGTCGCCGTCGAGCGGCAGACCGATTCGTCGATGCTGGTGTCGTGGAGCGATCCGACGCGCTGCCGC TACGACGAACAACGCTGGATCAGCGCGAAGGCGCGCCGGCTGGCGCGCTGCGCGCTCACCGGGCAACCGATCCGGGTCGG CGACGCGATCTACAAACCCCAGTGGCGCGGCGAGAAACGCCCCGCGAACTGCCGCGAGATGGTGCTCGCGACGGCGCTCG AGCAGTTCGTCGCCCGGCAGTCCCGGGCATGA
Upstream 100 bases:
>100_bases CGGCGGCTATCGTCAGCATCGGGTCATCGGCACACGTCGCGCGCCACGCGAACGGGGCCGACCGGCCCGCGCCGCCCGTC ACCTGCCTGGATAAGCCGCC
Downstream 100 bases:
>100_bases CGCGCCGCGCCGCACGCTTCGGCCGCGTCCGTGGGCGCGGCCTCCCTACTCGAAAGGAACCTTCATGAGCACGTTCACCA CCCGCGACGGCGTGTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MDAFNRWEHMITSLGPLSATGVRMPPLPRTREADGSRRPHRDDAPVPSSGDVRRRSAIVAVERQTDSSMLVSWSDPTRCR YDEQRWISAKARRLARCALTGQPIRVGDAIYKPQWRGEKRPANCREMVLATALEQFVARQSRA
Sequences:
>Translated_143_residues MDAFNRWEHMITSLGPLSATGVRMPPLPRTREADGSRRPHRDDAPVPSSGDVRRRSAIVAVERQTDSSMLVSWSDPTRCR YDEQRWISAKARRLARCALTGQPIRVGDAIYKPQWRGEKRPANCREMVLATALEQFVARQSRA >Mature_143_residues MDAFNRWEHMITSLGPLSATGVRMPPLPRTREADGSRRPHRDDAPVPSSGDVRRRSAIVAVERQTDSSMLVSWSDPTRCR YDEQRWISAKARRLARCALTGQPIRVGDAIYKPQWRGEKRPANCREMVLATALEQFVARQSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16258; Mature: 16258
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFNRWEHMITSLGPLSATGVRMPPLPRTREADGSRRPHRDDAPVPSSGDVRRRSAIVA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE VERQTDSSMLVSWSDPTRCRYDEQRWISAKARRLARCALTGQPIRVGDAIYKPQWRGEKR EECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC PANCREMVLATALEQFVARQSRA CCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAFNRWEHMITSLGPLSATGVRMPPLPRTREADGSRRPHRDDAPVPSSGDVRRRSAIVA CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE VERQTDSSMLVSWSDPTRCRYDEQRWISAKARRLARCALTGQPIRVGDAIYKPQWRGEKR EECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCC PANCREMVLATALEQFVARQSRA CCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA