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The map label for this gene is xerC [H]

Identifier: 107022990

GI number: 107022990

Start: 1593434

End: 1595170

Strand: Reverse

Name: xerC [H]

Synonym: Bcen_1438

Alternate gene names: 107022990

Gene position: 1595170-1593434 (Counterclockwise)

Preceding gene: 107022991

Following gene: 107022989

Centisome position: 48.42

GC content: 73.11

Gene sequence:

>1737_bases
ATGAAACCGCGCCTCGCTTCACCGCCTTCCTCCGATTCCGCGCCTGCGCCCGCAGGCTTTCCCGACGCCGACGAACTGGC
CGCGCTGCGTGCGTGGTACGCGGGCATGACCGTGCGCCAGGCCGTCGAACGCTACCTGCCCGACCGGCTCGGCGGCGGGC
GGTCGGCACGCGGCGTGATCGGCGCGATTCGCCGTCGCCTCGTGCGCGTCGCGCGGCAGGTCGGTCGCCCCGACCTCGCG
GAACGGCTCGGCCACGCGGACGGTGAGCGTTTGCGGGAGGCGAAGGTGGCCACCGACGCGATCGGCCTGCTGCGCCATGC
GCGCGCGCCGGTCCCGCAGATCAGCGACGACGTCGGCCTGTGGCTGCCGGCACGCGCGGTCGTGGCATTGCGTGCGCACG
GGATCGCGACGCTCGCCGACCTGACGGTGCGGATTCCGCGCCGGCGCCAGTGGTGGCGCGCGATCGCGGGCCTCGGCATG
GCCAGCGCGCGGCGCGTCGAGGCATTCTTCGCCGCGCATCCGGACCTGACCGAACGGGCGCGCGCGCTGATCGCCGCGAC
GCCGCGCGGCAGCATCGTGCCGTGGGAGCACCTGAAGCTGCCGCACGAAGTCGACGGCTCGGCCGGCACGTTCCGCGCGC
CGCGCGCGACCAGCACGCTCGACGCGGACAACGATTACGCGGCCGTGCACGCGTGGCTGTCGCTGCACGAATCGGCCGCG
ACGCGGCGCGCATACCGCAAGGAGGCCGAGCGGCTGATCCTGTGGGCGATCGTCGAGCGCGGCCGCGCGCTGTCGTCGCT
GACCACCGAGGATGCGCTCGCGTATCGCGCGTTCATCCGCCGCCCGACGCCGCACGAACGCTGGGTCGGGCCCGTGCGGC
CGCGCGGTGCGCCCGACTGGCGGCCGTTCTCCGGGGCGTTGTCCGCGCGGTCGGCGGCATACACGCTGTCGGTGCTCGGC
GCGCTGTTCCGCTGGCTGATCGAGCAGCGCTATCTGCTCGCGAATCCGTTCGCGGGCGTGAAGGTGCGCGACACGCGCGG
CGCGACCGCGCTCGACACGTCGCACGCGTTCACCGAAGGCGAGTGGCTGCTGGTCCGCACGATCGCCGACGGGCTCGAGT
TCGGCAAGCGCACGGCCGACGGCGCGCCGCAGCCGGGCTGGACGCCGGCCGCCGCGCAACGGCTGCGCTTCATTCTCGAT
TTCGGCTATGCGACCGGGTTGCGCGCGAGCGAACTGGTCGGCGCGACGCTCGGCGACATCGAGACGGATGCGCACGGCGA
CGCATGGCTGAAGGTGATCGGCAAGGGCAGCAAGGCGGCCCGCGTCGCGCTGCCGCCGCTGGCGCGCACGGCGCTCGATC
GCTATCTGGTCGCGCGCCGGTTGCCGGTCACGCCGGCGCGCTGGCGGCCCGATACGCCGCTGATTCCGCGCCTCGCGGAA
GACGACGCGGCCGCGATCACGAGCGTGCGGCTGTGGAAGGTGATGCAGCGTTTCTTCGCGCAGACGGCCGACGCCGTCGA
AGCCGACCATCCGGCGCTCGCGCACAAGCTGCGCCAGGCGAGCCCGCACTGGATGCGGCATACGCATGCGACCCACGCGC
TGGCGCGCGGCGCGGAGCTGACGACGGTGCGCGACAACCTGCGGCATGCATCGATCTCGACGACGTCGATCTATCTGCAT
GGCGACGACGTGAAGCGGGCGCGGCAGATGTCGAGCGCGTTCGGTATCGACAAATGA

Upstream 100 bases:

>100_bases
TCGCTTGCCGTCGCCGGCGCCTTCGTGTGGTCCCGCCCGATCGGGATATCGGCCGCTTCGACGTTGCCGCCCGCTCGGCG
CTTCTGTCAAACTGGCGCCC

Downstream 100 bases:

>100_bases
GTTGAACGGCGCGGCGTCGACGCGGGTCAGACGATGTTTCGATCCCGGAGATTCGCATGGCATCGAGCCAGAGCACGATC
GATTTCATCGTCGAGCAGAT

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MKPRLASPPSSDSAPAPAGFPDADELAALRAWYAGMTVRQAVERYLPDRLGGGRSARGVIGAIRRRLVRVARQVGRPDLA
ERLGHADGERLREAKVATDAIGLLRHARAPVPQISDDVGLWLPARAVVALRAHGIATLADLTVRIPRRRQWWRAIAGLGM
ASARRVEAFFAAHPDLTERARALIAATPRGSIVPWEHLKLPHEVDGSAGTFRAPRATSTLDADNDYAAVHAWLSLHESAA
TRRAYRKEAERLILWAIVERGRALSSLTTEDALAYRAFIRRPTPHERWVGPVRPRGAPDWRPFSGALSARSAAYTLSVLG
ALFRWLIEQRYLLANPFAGVKVRDTRGATALDTSHAFTEGEWLLVRTIADGLEFGKRTADGAPQPGWTPAAAQRLRFILD
FGYATGLRASELVGATLGDIETDAHGDAWLKVIGKGSKAARVALPPLARTALDRYLVARRLPVTPARWRPDTPLIPRLAE
DDAAAITSVRLWKVMQRFFAQTADAVEADHPALAHKLRQASPHWMRHTHATHALARGAELTTVRDNLRHASISTTSIYLH
GDDVKRARQMSSAFGIDK

Sequences:

>Translated_578_residues
MKPRLASPPSSDSAPAPAGFPDADELAALRAWYAGMTVRQAVERYLPDRLGGGRSARGVIGAIRRRLVRVARQVGRPDLA
ERLGHADGERLREAKVATDAIGLLRHARAPVPQISDDVGLWLPARAVVALRAHGIATLADLTVRIPRRRQWWRAIAGLGM
ASARRVEAFFAAHPDLTERARALIAATPRGSIVPWEHLKLPHEVDGSAGTFRAPRATSTLDADNDYAAVHAWLSLHESAA
TRRAYRKEAERLILWAIVERGRALSSLTTEDALAYRAFIRRPTPHERWVGPVRPRGAPDWRPFSGALSARSAAYTLSVLG
ALFRWLIEQRYLLANPFAGVKVRDTRGATALDTSHAFTEGEWLLVRTIADGLEFGKRTADGAPQPGWTPAAAQRLRFILD
FGYATGLRASELVGATLGDIETDAHGDAWLKVIGKGSKAARVALPPLARTALDRYLVARRLPVTPARWRPDTPLIPRLAE
DDAAAITSVRLWKVMQRFFAQTADAVEADHPALAHKLRQASPHWMRHTHATHALARGAELTTVRDNLRHASISTTSIYLH
GDDVKRARQMSSAFGIDK
>Mature_578_residues
MKPRLASPPSSDSAPAPAGFPDADELAALRAWYAGMTVRQAVERYLPDRLGGGRSARGVIGAIRRRLVRVARQVGRPDLA
ERLGHADGERLREAKVATDAIGLLRHARAPVPQISDDVGLWLPARAVVALRAHGIATLADLTVRIPRRRQWWRAIAGLGM
ASARRVEAFFAAHPDLTERARALIAATPRGSIVPWEHLKLPHEVDGSAGTFRAPRATSTLDADNDYAAVHAWLSLHESAA
TRRAYRKEAERLILWAIVERGRALSSLTTEDALAYRAFIRRPTPHERWVGPVRPRGAPDWRPFSGALSARSAAYTLSVLG
ALFRWLIEQRYLLANPFAGVKVRDTRGATALDTSHAFTEGEWLLVRTIADGLEFGKRTADGAPQPGWTPAAAQRLRFILD
FGYATGLRASELVGATLGDIETDAHGDAWLKVIGKGSKAARVALPPLARTALDRYLVARRLPVTPARWRPDTPLIPRLAE
DDAAAITSVRLWKVMQRFFAQTADAVEADHPALAHKLRQASPHWMRHTHATHALARGAELTTVRDNLRHASISTTSIYLH
GDDVKRARQMSSAFGIDK

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=260, Percent_Identity=30.3846153846154, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789261, Length=340, Percent_Identity=28.2352941176471, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 63434; Mature: 63434

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRLASPPSSDSAPAPAGFPDADELAALRAWYAGMTVRQAVERYLPDRLGGGRSARGVI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHH
GAIRRRLVRVARQVGRPDLAERLGHADGERLREAKVATDAIGLLRHARAPVPQISDDVGL
HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
WLPARAVVALRAHGIATLADLTVRIPRRRQWWRAIAGLGMASARRVEAFFAAHPDLTERA
HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
RALIAATPRGSIVPWEHLKLPHEVDGSAGTFRAPRATSTLDADNDYAAVHAWLSLHESAA
HHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TRRAYRKEAERLILWAIVERGRALSSLTTEDALAYRAFIRRPTPHERWVGPVRPRGAPDW
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC
RPFSGALSARSAAYTLSVLGALFRWLIEQRYLLANPFAGVKVRDTRGATALDTSHAFTEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCCCCC
EWLLVRTIADGLEFGKRTADGAPQPGWTPAAAQRLRFILDFGYATGLRASELVGATLGDI
CEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
ETDAHGDAWLKVIGKGSKAARVALPPLARTALDRYLVARRLPVTPARWRPDTPLIPRLAE
CCCCCCCHHHHEECCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DDAAAITSVRLWKVMQRFFAQTADAVEADHPALAHKLRQASPHWMRHTHATHALARGAEL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
TTVRDNLRHASISTTSIYLHGDDVKRARQMSSAFGIDK
HHHHHHHHHCEEEEEEEEEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKPRLASPPSSDSAPAPAGFPDADELAALRAWYAGMTVRQAVERYLPDRLGGGRSARGVI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHH
GAIRRRLVRVARQVGRPDLAERLGHADGERLREAKVATDAIGLLRHARAPVPQISDDVGL
HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
WLPARAVVALRAHGIATLADLTVRIPRRRQWWRAIAGLGMASARRVEAFFAAHPDLTERA
HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHH
RALIAATPRGSIVPWEHLKLPHEVDGSAGTFRAPRATSTLDADNDYAAVHAWLSLHESAA
HHHEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
TRRAYRKEAERLILWAIVERGRALSSLTTEDALAYRAFIRRPTPHERWVGPVRPRGAPDW
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC
RPFSGALSARSAAYTLSVLGALFRWLIEQRYLLANPFAGVKVRDTRGATALDTSHAFTEG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCCCCC
EWLLVRTIADGLEFGKRTADGAPQPGWTPAAAQRLRFILDFGYATGLRASELVGATLGDI
CEEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
ETDAHGDAWLKVIGKGSKAARVALPPLARTALDRYLVARRLPVTPARWRPDTPLIPRLAE
CCCCCCCHHHHEECCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
DDAAAITSVRLWKVMQRFFAQTADAVEADHPALAHKLRQASPHWMRHTHATHALARGAEL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
TTVRDNLRHASISTTSIYLHGDDVKRARQMSSAFGIDK
HHHHHHHHHCEEEEEEEEEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA