| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022967
Identifier: 107022967
GI number: 107022967
Start: 1560904
End: 1562250
Strand: Reverse
Name: 107022967
Synonym: Bcen_1415
Alternate gene names: NA
Gene position: 1562250-1560904 (Counterclockwise)
Preceding gene: 107022968
Following gene: 107022963
Centisome position: 47.42
GC content: 64.44
Gene sequence:
>1347_bases ATGAGCGGGCCGAAGGTCGTCCGGATCGTAACGCGCGAGGAGATCATCGCGATCTGCGAAGGACATTTGCGGCGTCTCGA CCAGGCCATTGCCATATGGGTTGCCGAGGGCACGTATATCGGCATGCTGTCGGACGAAGAGATCGCGGCCACCCGGGCAC GCCGCGCTGCGCTGGCCGCCTTGATCGCGGCCGACGCGTTCATGGATTTACAGAAGAAGGTGCCTGACGAGATTGCTTTC CTGAAGGCGGATCTCGCACGACGTCAACTGGAGGCGGTGGATCGTGCCGAACAGGCAGCGAAGCGACGCCGGCAGGGCCG GCACGGCGCGACAACGTTGCTCGGCGCGCTCGAAGCAAAAGGCATCGAGGTTCCGGTCGAGCTTCGTCGTCAACTTGATC GGTTGAGTTCGGGCGACGTTGTCGAGCATGCCGATGCGCTGCTGGCGCAAGGGTATGCGCTGCTGACACCGGATGTGGAG CGTACGCTCAACGACGCGCAACGGGCGCTGGCGACTCGCCTGATGCCGGCCGAAACGCCTGCCGCCTTTCAGGCGTGGAA AGCAGCGCAGTCGATTGCGTCTCGTGATCCGGTGCTGGACCGTCTCGATCGGCAGATTGGGGAAGCGCGCGTGTTCCTGG GAGCGCAGGAAGTCGCCGGTTTTTCGTCGCGGCTCGACGGGCTTGATGATGAGACGAACGAAGCGCGGCGGAATCTGTTA CTCGACAGCCTGATCCTCGATCTGGCGAATGCGATCGAGACCGCTCGCGCACGTCGGGCGGCCATCACGGTGCTGGAGGA GTTGACGGCCGAGATGGGTGCATACGACACGGCGGCGACCGTGGCGTTCGCCGAACGCGCTCGACAGTGCGATACCACGA CGTTGCCGGATATCGTGGCTGAATTGACCCGGGCCGGCCAGGACTTGATCGCGCAGCTGCGGCAGGAACAAGCAGCCGTG GCTCGGCGCAACGCGATCCTGAGCGGCCTGGCGCGATTAGGCTATGACGTGCATGAGGGCATGACGACCGCGTGGGCGAA GGACGGCCGCGTCGTCGTCAAGAAGCCGTCCCTGCCGGGGTATGGTGTCGAAGTCGGCGGTCAGGCCCAAGCCGGTCGTC TGCAGGTTCGGGCGGTGTCCCTCGTCGCGAATCGCGACGTTGCTCGCGACAAGGACGTCGAGACGCTTTGGTGTGGCGAC TTCGCTCGACTACAAGCGTTACTCGCGCAACATGGCGACGATCTGCTGATCGAACGTGCGATGGGTGTCGGCGAGGTGCC GCTCAAGGTCGTTGCCGAGACAGGCGACATGTCGAGCACGGAAGCGGGCAAGCGGACGATGGGGTGA
Upstream 100 bases:
>100_bases TGCACCGCGTTTCGTCGCAGGCGTGGTACCACGAGCCGGAGGCGGAGAAGGCGCGCTTGAAAGCCGCAGTGGAGCTTGCG CTCAGCCAGGAGGTGGCAGC
Downstream 100 bases:
>100_bases GCCGTTGCGGGGAACGGCACGCCTGGCATTCGCGTATCGCCCGCATTTGGGTATCGCGATTCGCGCAGTGCTGGAGCGAA TCTAGTTCCCTTCCGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSGPKVVRIVTREEIIAICEGHLRRLDQAIAIWVAEGTYIGMLSDEEIAATRARRAALAALIAADAFMDLQKKVPDEIAF LKADLARRQLEAVDRAEQAAKRRRQGRHGATTLLGALEAKGIEVPVELRRQLDRLSSGDVVEHADALLAQGYALLTPDVE RTLNDAQRALATRLMPAETPAAFQAWKAAQSIASRDPVLDRLDRQIGEARVFLGAQEVAGFSSRLDGLDDETNEARRNLL LDSLILDLANAIETARARRAAITVLEELTAEMGAYDTAATVAFAERARQCDTTTLPDIVAELTRAGQDLIAQLRQEQAAV ARRNAILSGLARLGYDVHEGMTTAWAKDGRVVVKKPSLPGYGVEVGGQAQAGRLQVRAVSLVANRDVARDKDVETLWCGD FARLQALLAQHGDDLLIERAMGVGEVPLKVVAETGDMSSTEAGKRTMG
Sequences:
>Translated_448_residues MSGPKVVRIVTREEIIAICEGHLRRLDQAIAIWVAEGTYIGMLSDEEIAATRARRAALAALIAADAFMDLQKKVPDEIAF LKADLARRQLEAVDRAEQAAKRRRQGRHGATTLLGALEAKGIEVPVELRRQLDRLSSGDVVEHADALLAQGYALLTPDVE RTLNDAQRALATRLMPAETPAAFQAWKAAQSIASRDPVLDRLDRQIGEARVFLGAQEVAGFSSRLDGLDDETNEARRNLL LDSLILDLANAIETARARRAAITVLEELTAEMGAYDTAATVAFAERARQCDTTTLPDIVAELTRAGQDLIAQLRQEQAAV ARRNAILSGLARLGYDVHEGMTTAWAKDGRVVVKKPSLPGYGVEVGGQAQAGRLQVRAVSLVANRDVARDKDVETLWCGD FARLQALLAQHGDDLLIERAMGVGEVPLKVVAETGDMSSTEAGKRTMG >Mature_447_residues SGPKVVRIVTREEIIAICEGHLRRLDQAIAIWVAEGTYIGMLSDEEIAATRARRAALAALIAADAFMDLQKKVPDEIAFL KADLARRQLEAVDRAEQAAKRRRQGRHGATTLLGALEAKGIEVPVELRRQLDRLSSGDVVEHADALLAQGYALLTPDVER TLNDAQRALATRLMPAETPAAFQAWKAAQSIASRDPVLDRLDRQIGEARVFLGAQEVAGFSSRLDGLDDETNEARRNLLL DSLILDLANAIETARARRAAITVLEELTAEMGAYDTAATVAFAERARQCDTTTLPDIVAELTRAGQDLIAQLRQEQAAVA RRNAILSGLARLGYDVHEGMTTAWAKDGRVVVKKPSLPGYGVEVGGQAQAGRLQVRAVSLVANRDVARDKDVETLWCGDF ARLQALLAQHGDDLLIERAMGVGEVPLKVVAETGDMSSTEAGKRTMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48504; Mature: 48373
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPKVVRIVTREEIIAICEGHLRRLDQAIAIWVAEGTYIGMLSDEEIAATRARRAALAA CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCHHHHHHHHHHHHHHH LIAADAFMDLQKKVPDEIAFLKADLARRQLEAVDRAEQAAKRRRQGRHGATTLLGALEAK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GIEVPVELRRQLDRLSSGDVVEHADALLAQGYALLTPDVERTLNDAQRALATRLMPAETP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCC AAFQAWKAAQSIASRDPVLDRLDRQIGEARVFLGAQEVAGFSSRLDGLDDETNEARRNLL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH LDSLILDLANAIETARARRAAITVLEELTAEMGAYDTAATVAFAERARQCDTTTLPDIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH ELTRAGQDLIAQLRQEQAAVARRNAILSGLARLGYDVHEGMTTAWAKDGRVVVKKPSLPG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCCCEEEEECCCCCC YGVEVGGQAQAGRLQVRAVSLVANRDVARDKDVETLWCGDFARLQALLAQHGDDLLIERA CCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHH MGVGEVPLKVVAETGDMSSTEAGKRTMG CCCCCCCHHEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SGPKVVRIVTREEIIAICEGHLRRLDQAIAIWVAEGTYIGMLSDEEIAATRARRAALAA CCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEECCCHHHHHHHHHHHHHHH LIAADAFMDLQKKVPDEIAFLKADLARRQLEAVDRAEQAAKRRRQGRHGATTLLGALEAK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GIEVPVELRRQLDRLSSGDVVEHADALLAQGYALLTPDVERTLNDAQRALATRLMPAETP CCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCC AAFQAWKAAQSIASRDPVLDRLDRQIGEARVFLGAQEVAGFSSRLDGLDDETNEARRNLL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH LDSLILDLANAIETARARRAAITVLEELTAEMGAYDTAATVAFAERARQCDTTTLPDIVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH ELTRAGQDLIAQLRQEQAAVARRNAILSGLARLGYDVHEGMTTAWAKDGRVVVKKPSLPG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCCCEEEEECCCCCC YGVEVGGQAQAGRLQVRAVSLVANRDVARDKDVETLWCGDFARLQALLAQHGDDLLIERA CCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHH MGVGEVPLKVVAETGDMSSTEAGKRTMG CCCCCCCHHEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA