| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022954
Identifier: 107022954
GI number: 107022954
Start: 1540773
End: 1541708
Strand: Reverse
Name: 107022954
Synonym: Bcen_1402
Alternate gene names: NA
Gene position: 1541708-1540773 (Counterclockwise)
Preceding gene: 107022960
Following gene: 107022953
Centisome position: 46.8
GC content: 67.74
Gene sequence:
>936_bases GTGCGGCGCCCGCTCAGCTGTACTCCTGGCGCCCGCGGCGCTGTGCTCTTGAGCGGGTGTGTCGCGTGCAGTAGATTAGG TTCCGCTCCGCCCGACGACGGTCATCATGATGAACCTTTTGGAAGCGATGCGTATTTTCGGTGCAATCGTCGAGCATGGC GGGCTGTCCGGCGCGGCGTCCGAACTGAGGCTCGACGTCGCGCAGGTCGGCGCGCGGCTCGATGGGCTCGAACGCTATCT CGGCTGCCGGTTGTTGCTGGACCGCTCGGGCGACGCGGTCGCATGCACCGAGGCCGGCGTCGCGTTTTACGCGTGTTGCC GGCGCACGCTGTCCGCGGTCGCGCAGGCGACCGGCGCGAGCGGAGCCGGTGCGTGCGCAACGGTTTCGCGTTCGCCCGTC GCGGGCTTGCCGTTGCCCGAAACCACTCGCTGCAGCGACGGAGCATCGATCGCCGCGCCCACGACACTACACCGGTTAAC GCGTTGAATACGTCCACTGCATCCACCGATACGACCGCCGAGCGCATCCGTCGCCGCTTCGGCCATTTCCTTCACGCGGC CGAGCTCGCCGGGCTGGTCGTGATCGGGCTGGCGACCGCGTTCGCGATGGCGCAGGAAGCGTGGAAGGTCGTGCTCGCGG GCGAGGTGTCGCTGACCGACCTGCTGCTGATGTTCCTGTATCTGGAAGTGCTCGCGATGGACCTGCGCTACCTGCGGCTC GGCCGGCTGCCGGTGCGGTTTCCGCTGTTCATCGCGATGACGTCGCTCGCGCGCGACCTGATCCTGCGCGGCGCGACGGA CAGCCCCGAGCGGATGCTGATGACGACCTTCGGGATCGTGCTGCTCGCGGTCGGCGTGCTGATCCTGAGCTTCGGCCAGC ATCGCTTTCCGGCGGACGTCGACGACGTCGAGGACGACGTGCATGTCCGCAAGTAA
Upstream 100 bases:
>100_bases CGCGTAACGTCGTCGAGCATGCAATCTAGCAGCTTCGGCGGGTCTTTGGAACACGTATCGACGATCTGTCATTCGAATGG ATCAAACCGGGCCGGGTTTT
Downstream 100 bases:
>100_bases CGCGGCCCGGGCGGCATTCGAAGCGAACCCCGGCGCGCCGTGCGCGGTGCGGCGGTCTCCCCATCATTCCATCGAGCGAG GTGTCGCATGACCAGGCAAT
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: Phosphate-Starvation-Inducible E-Like Protein; Protein PsiE
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRRPLSCTPGARGAVLLSGCVACSRLGSAPPDDGHHDEPFGSDAYFRCNRRAWRAVRRGVRTEARRRAGRRAARWARTLS RLPVVAGPLGRRGRMHRGRRRVLRVLPAHAVRGRAGDRRERSRCVRNGFAFARRGLAVARNHSLQRRSIDRRAHDTTPVN ALNTSTASTDTTAERIRRRFGHFLHAAELAGLVVIGLATAFAMAQEAWKVVLAGEVSLTDLLLMFLYLEVLAMDLRYLRL GRLPVRFPLFIAMTSLARDLILRGATDSPERMLMTTFGIVLLAVGVLILSFGQHRFPADVDDVEDDVHVRK
Sequences:
>Translated_311_residues MRRPLSCTPGARGAVLLSGCVACSRLGSAPPDDGHHDEPFGSDAYFRCNRRAWRAVRRGVRTEARRRAGRRAARWARTLS RLPVVAGPLGRRGRMHRGRRRVLRVLPAHAVRGRAGDRRERSRCVRNGFAFARRGLAVARNHSLQRRSIDRRAHDTTPVN ALNTSTASTDTTAERIRRRFGHFLHAAELAGLVVIGLATAFAMAQEAWKVVLAGEVSLTDLLLMFLYLEVLAMDLRYLRL GRLPVRFPLFIAMTSLARDLILRGATDSPERMLMTTFGIVLLAVGVLILSFGQHRFPADVDDVEDDVHVRK >Mature_311_residues MRRPLSCTPGARGAVLLSGCVACSRLGSAPPDDGHHDEPFGSDAYFRCNRRAWRAVRRGVRTEARRRAGRRAARWARTLS RLPVVAGPLGRRGRMHRGRRRVLRVLPAHAVRGRAGDRRERSRCVRNGFAFARRGLAVARNHSLQRRSIDRRAHDTTPVN ALNTSTASTDTTAERIRRRFGHFLHAAELAGLVVIGLATAFAMAQEAWKVVLAGEVSLTDLLLMFLYLEVLAMDLRYLRL GRLPVRFPLFIAMTSLARDLILRGATDSPERMLMTTFGIVLLAVGVLILSFGQHRFPADVDDVEDDVHVRK
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34751; Mature: 34751
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPLSCTPGARGAVLLSGCVACSRLGSAPPDDGHHDEPFGSDAYFRCNRRAWRAVRRGV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RTEARRRAGRRAARWARTLSRLPVVAGPLGRRGRMHRGRRRVLRVLPAHAVRGRAGDRRE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH RSRCVRNGFAFARRGLAVARNHSLQRRSIDRRAHDTTPVNALNTSTASTDTTAERIRRRF HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH GHFLHAAELAGLVVIGLATAFAMAQEAWKVVLAGEVSLTDLLLMFLYLEVLAMDLRYLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRLPVRFPLFIAMTSLARDLILRGATDSPERMLMTTFGIVLLAVGVLILSFGQHRFPADV CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDVEDDVHVRK CCCCCCCCCCC >Mature Secondary Structure MRRPLSCTPGARGAVLLSGCVACSRLGSAPPDDGHHDEPFGSDAYFRCNRRAWRAVRRGV CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RTEARRRAGRRAARWARTLSRLPVVAGPLGRRGRMHRGRRRVLRVLPAHAVRGRAGDRRE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH RSRCVRNGFAFARRGLAVARNHSLQRRSIDRRAHDTTPVNALNTSTASTDTTAERIRRRF HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH GHFLHAAELAGLVVIGLATAFAMAQEAWKVVLAGEVSLTDLLLMFLYLEVLAMDLRYLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRLPVRFPLFIAMTSLARDLILRGATDSPERMLMTTFGIVLLAVGVLILSFGQHRFPADV CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DDVEDDVHVRK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA