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The map label for this gene is ychE [H]

Identifier: 107022946

GI number: 107022946

Start: 1533746

End: 1534456

Strand: Reverse

Name: ychE [H]

Synonym: Bcen_1394

Alternate gene names: 107022946

Gene position: 1534456-1533746 (Counterclockwise)

Preceding gene: 107022948

Following gene: 107022945

Centisome position: 46.58

GC content: 68.21

Gene sequence:

>711_bases
ATGGCGTGCGCCGCGCATCGAAAACGAACCGGCGTGTGCGTGTCACGTGCCGCGCGAGACGGGAGCGACCTTGTGTCCTT
CGACCTGACCTTTTCCATCAAGGTGTTCGCGGCGCTGTTCGCGATCATGAACCCGATCGCGAACATTCCGGTGTTCCTGT
CGCTGACCGAAGGCGCGGCGGACGGCGTGCGTCGCAAGGTCGCGCTGACGGCCGCGATCGGCGTGACGGTCGGCTGCATC
GTGTCGGCGGTCGCGGGCGGCGCGATCCTGCACGTGTTCGGCTTGACGATCGACGATTTCCGGCTCGCGGGCGGGTTGCT
GGTGCTGTTGATCGCGTTGTCGATGCTGCATGGTGCGCCGAGCCGCCAGCATGCGCCGGGCGCCGACGAAAGCGCCGATC
CGGCAGCGGCCGACAGCGTCGCGATCTACCCGCTGACGATCCCGTTGCTGGTCGGCCCCGGCACGATCGCGACGATGATC
GTGCTCGGGCACGGTGCCGTCGCGACCGGGCAGGAGTTCGCGTTCGCGCTCGGGCTGGCCGCGTTTCTCGTGCTGCTGGC
CGTGTCGCTGCTGTCGGCGCCGTTGATCGGCCACTACCTGTCGCCGCGCGTGACGGCCGTCACGCAGCGCCTGATGGGGA
TGATTCTCGCGGCGATCGCGATGCAGATGATCGTCGCGAGCCTGAAAGCCGCGTTCGGGCTGCCGCATTGA

Upstream 100 bases:

>100_bases
GTCGCGTCGACGCGAATCTCATGACCCATGAAAGTGTCGGTGGCCTGCATCGAACGGGGCCCTCCGTCGTGAATGAACGT
GGTGCGTGGATCGTATCAGC

Downstream 100 bases:

>100_bases
GCGTCCGTTCGATTGCATGGAGTCGCTGAATGAACACGCTGATCGTCTTGTCCTATCCCGATCTCGACGCGGCGCGGCGC
GCGCTGGCCGAACTCGGCAC

Product: multiple antibiotic resistance (MarC)-related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MACAAHRKRTGVCVSRAARDGSDLVSFDLTFSIKVFAALFAIMNPIANIPVFLSLTEGAADGVRRKVALTAAIGVTVGCI
VSAVAGGAILHVFGLTIDDFRLAGGLLVLLIALSMLHGAPSRQHAPGADESADPAAADSVAIYPLTIPLLVGPGTIATMI
VLGHGAVATGQEFAFALGLAAFLVLLAVSLLSAPLIGHYLSPRVTAVTQRLMGMILAAIAMQMIVASLKAAFGLPH

Sequences:

>Translated_236_residues
MACAAHRKRTGVCVSRAARDGSDLVSFDLTFSIKVFAALFAIMNPIANIPVFLSLTEGAADGVRRKVALTAAIGVTVGCI
VSAVAGGAILHVFGLTIDDFRLAGGLLVLLIALSMLHGAPSRQHAPGADESADPAAADSVAIYPLTIPLLVGPGTIATMI
VLGHGAVATGQEFAFALGLAAFLVLLAVSLLSAPLIGHYLSPRVTAVTQRLMGMILAAIAMQMIVASLKAAFGLPH
>Mature_235_residues
ACAAHRKRTGVCVSRAARDGSDLVSFDLTFSIKVFAALFAIMNPIANIPVFLSLTEGAADGVRRKVALTAAIGVTVGCIV
SAVAGGAILHVFGLTIDDFRLAGGLLVLLIALSMLHGAPSRQHAPGADESADPAAADSVAIYPLTIPLLVGPGTIATMIV
LGHGAVATGQEFAFALGLAAFLVLLAVSLLSAPLIGHYLSPRVTAVTQRLMGMILAAIAMQMIVASLKAAFGLPH

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=206, Percent_Identity=34.9514563106796, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789842, Length=194, Percent_Identity=29.3814432989691, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787809, Length=192, Percent_Identity=30.2083333333333, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 24059; Mature: 23928

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACAAHRKRTGVCVSRAARDGSDLVSFDLTFSIKVFAALFAIMNPIANIPVFLSLTEGAA
CCCCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
DGVRRKVALTAAIGVTVGCIVSAVAGGAILHVFGLTIDDFRLAGGLLVLLIALSMLHGAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SRQHAPGADESADPAAADSVAIYPLTIPLLVGPGTIATMIVLGHGAVATGQEFAFALGLA
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH
AFLVLLAVSLLSAPLIGHYLSPRVTAVTQRLMGMILAAIAMQMIVASLKAAFGLPH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ACAAHRKRTGVCVSRAARDGSDLVSFDLTFSIKVFAALFAIMNPIANIPVFLSLTEGAA
CCCCCCCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
DGVRRKVALTAAIGVTVGCIVSAVAGGAILHVFGLTIDDFRLAGGLLVLLIALSMLHGAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
SRQHAPGADESADPAAADSVAIYPLTIPLLVGPGTIATMIVLGHGAVATGQEFAFALGLA
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHH
AFLVLLAVSLLSAPLIGHYLSPRVTAVTQRLMGMILAAIAMQMIVASLKAAFGLPH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]