| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022839
Identifier: 107022839
GI number: 107022839
Start: 1412369
End: 1412779
Strand: Reverse
Name: 107022839
Synonym: Bcen_1287
Alternate gene names: NA
Gene position: 1412779-1412369 (Counterclockwise)
Preceding gene: 107022840
Following gene: 107022838
Centisome position: 42.88
GC content: 71.53
Gene sequence:
>411_bases ATGTACTTCCTCGATCCGGCGTCCGGCCGGCGCCGACGCGCTTATCTGCGCGACAAGGCGGTTGCGGGCCGGCACGACGT GGCCGATTATGCGAATACGCAGGTGAAGCGGGCGGCCGACCATGCGCGCGGCGCGATCGTCGGCCTGCGGGCGGACTGGC TCGCGGGCGATGCGAGCGACGTGCAGGTGGCCGAGCGCGTGCGCGCGGCGCTCGGCTGGCTCGTCGCCCGCCCGCGCGAC ATCGACGTGAGCGTCGAGCGCGGCAACGTGTGCTTGACCGGACAGGTCGAGGAAGCCGAACGTCAGGCGCTGATCGACGG CGTCGCCGCGCTGCATGGCGTGCATCACGTCGAGGACGCGATGGGCGCGCGCAGCGAGTACAAGGCGTCGCCCGACGGTC ATTCGCAGTGA
Upstream 100 bases:
>100_bases GGTCGTTCCGGGTATTGCCTACGGTGCCTCCATGAACTCCAGAACCCCTTCGAACCCGTTGTTGAACCTTGCGGTGGCCG TCGCTTGCGGAGCGGCCGCG
Downstream 100 bases:
>100_bases CGCGGCCGCGGCTGCCCGCACCGGCGGGGGGCCGGTGAACGAGTACGACACGCATTCGGCGCACGCACGGCTGCCGGCAC GACGGCAGCCTGGCGCCCCA
Product: transport-associated
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MYFLDPASGRRRRAYLRDKAVAGRHDVADYANTQVKRAADHARGAIVGLRADWLAGDASDVQVAERVRAALGWLVARPRD IDVSVERGNVCLTGQVEEAERQALIDGVAALHGVHHVEDAMGARSEYKASPDGHSQ
Sequences:
>Translated_136_residues MYFLDPASGRRRRAYLRDKAVAGRHDVADYANTQVKRAADHARGAIVGLRADWLAGDASDVQVAERVRAALGWLVARPRD IDVSVERGNVCLTGQVEEAERQALIDGVAALHGVHHVEDAMGARSEYKASPDGHSQ >Mature_136_residues MYFLDPASGRRRRAYLRDKAVAGRHDVADYANTQVKRAADHARGAIVGLRADWLAGDASDVQVAERVRAALGWLVARPRD IDVSVERGNVCLTGQVEEAERQALIDGVAALHGVHHVEDAMGARSEYKASPDGHSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14783; Mature: 14783
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFLDPASGRRRRAYLRDKAVAGRHDVADYANTQVKRAADHARGAIVGLRADWLAGDASD CEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCH VQVAERVRAALGWLVARPRDIDVSVERGNVCLTGQVEEAERQALIDGVAALHGVHHVEDA HHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH MGARSEYKASPDGHSQ HCCCCCCCCCCCCCCC >Mature Secondary Structure MYFLDPASGRRRRAYLRDKAVAGRHDVADYANTQVKRAADHARGAIVGLRADWLAGDASD CEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCH VQVAERVRAALGWLVARPRDIDVSVERGNVCLTGQVEEAERQALIDGVAALHGVHHVEDA HHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH MGARSEYKASPDGHSQ HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA