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The map label for this gene is speE [H]

Identifier: 107022826

GI number: 107022826

Start: 1401144

End: 1401980

Strand: Reverse

Name: speE [H]

Synonym: Bcen_1274

Alternate gene names: 107022826

Gene position: 1401980-1401144 (Counterclockwise)

Preceding gene: 107022827

Following gene: 107022823

Centisome position: 42.55

GC content: 66.55

Gene sequence:

>837_bases
ATGGCCGAGGATCGAACTTCCTACGACGCGTTCGTCAGGTTCCTGGCGACGCCGCTGAACGACGGCCGGCCGTTCGTGCT
GGAGACGCAGCACGCGGTCTCGCTGCACTTCGATCATTTCGGCACCCAGAGCTTCATGTCGCTGCGCGATCCGGTGCGGC
TCGCGCTCGGCTATACGCGCGTGATGATGGGTTTCCTGCTGTTGCAGGCCGAGCCGGCGCACATCTGCATGCTCGGGCTC
GGCGGCGGGTCGCTCGCGAAGTACTGCTACCGCCACTTGCCGGGCACGACGCTCGACGCGGTCGAGATCAATCCGGACGT
GATCGCGCTGCGCGACGTGTTCAGGATTCCTGCCGATGATGCGCGCTTTCGCGTGGTATGCGCGGACGGCGCGGATCATC
TCGAGCGGGCGGACGTCCGGACGGACGTGATCCTGCACGACGCGTTCGTCGCCGACGGGAGGCGCGGGCGCTGTACGGGC
GGCACATTTCTCGATATGTGCCGCGCGCGCCTGAGCGAATCCGGCGTGCTCGCGATCAACTTCATGGACGACGATCCCGC
CTTGCCGGAGCACCTCGAGCAACTGCGATCGGTATTCGGTTCGTCGTATGCGCTGGTGCCGTGTGGCGACGACAACAACT
TCGTTGCATTCGCGTGGAAGGACGGCAGCCGGCTGCCGTCGTTGCGTATCCTGCTGGAGCGGACGCTCGCCTGCCCGCAG
GCCGGCGAACTGAAGCTCGCTGCCACCGCGCGGCGCATGAAGCACGGCGAGGGCATCGATCCGCGGCGGCTGGTGTGGCG
TGCGCAATCGCACGAACGTTGGGAGATCGGCGCGTAA

Upstream 100 bases:

>100_bases
ATGCTGAAGGCGTGCTATCTGAAGAAGGTCTGAGCGCACGGTTCAGGCAGCCGCTGCAGCCGCGTTTTCATCCGCCGCAT
TTCCAGCCGATTACCCGCAC

Downstream 100 bases:

>100_bases
CGGTGCCGGGGTGCCGGGGTGCCGGGGGGGGTACCCGGCCGGCGCCGCGCGGCCTTGACGGCCGCGCTTACTTCACGCGC
TTGCCGATCGCGCTGCGGGT

Product: spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MAEDRTSYDAFVRFLATPLNDGRPFVLETQHAVSLHFDHFGTQSFMSLRDPVRLALGYTRVMMGFLLLQAEPAHICMLGL
GGGSLAKYCYRHLPGTTLDAVEINPDVIALRDVFRIPADDARFRVVCADGADHLERADVRTDVILHDAFVADGRRGRCTG
GTFLDMCRARLSESGVLAINFMDDDPALPEHLEQLRSVFGSSYALVPCGDDNNFVAFAWKDGSRLPSLRILLERTLACPQ
AGELKLAATARRMKHGEGIDPRRLVWRAQSHERWEIGA

Sequences:

>Translated_278_residues
MAEDRTSYDAFVRFLATPLNDGRPFVLETQHAVSLHFDHFGTQSFMSLRDPVRLALGYTRVMMGFLLLQAEPAHICMLGL
GGGSLAKYCYRHLPGTTLDAVEINPDVIALRDVFRIPADDARFRVVCADGADHLERADVRTDVILHDAFVADGRRGRCTG
GTFLDMCRARLSESGVLAINFMDDDPALPEHLEQLRSVFGSSYALVPCGDDNNFVAFAWKDGSRLPSLRILLERTLACPQ
AGELKLAATARRMKHGEGIDPRRLVWRAQSHERWEIGA
>Mature_277_residues
AEDRTSYDAFVRFLATPLNDGRPFVLETQHAVSLHFDHFGTQSFMSLRDPVRLALGYTRVMMGFLLLQAEPAHICMLGLG
GGSLAKYCYRHLPGTTLDAVEINPDVIALRDVFRIPADDARFRVVCADGADHLERADVRTDVILHDAFVADGRRGRCTGG
TFLDMCRARLSESGVLAINFMDDDPALPEHLEQLRSVFGSSYALVPCGDDNNFVAFAWKDGSRLPSLRILLERTLACPQA
GELKLAATARRMKHGEGIDPRRLVWRAQSHERWEIGA

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 30942; Mature: 30811

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDRTSYDAFVRFLATPLNDGRPFVLETQHAVSLHFDHFGTQSFMSLRDPVRLALGYTR
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
VMMGFLLLQAEPAHICMLGLGGGSLAKYCYRHLPGTTLDAVEINPDVIALRDVFRIPADD
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEHHHCCCCCC
ARFRVVCADGADHLERADVRTDVILHDAFVADGRRGRCTGGTFLDMCRARLSESGVLAIN
CEEEEEECCCHHHHHHHCCHHHEEEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
FMDDDPALPEHLEQLRSVFGSSYALVPCGDDNNFVAFAWKDGSRLPSLRILLERTLACPQ
EECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC
AGELKLAATARRMKHGEGIDPRRLVWRAQSHERWEIGA
CCCEEHHHHHHHHHCCCCCCHHHHEEECCCCCCEECCC
>Mature Secondary Structure 
AEDRTSYDAFVRFLATPLNDGRPFVLETQHAVSLHFDHFGTQSFMSLRDPVRLALGYTR
CCCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
VMMGFLLLQAEPAHICMLGLGGGSLAKYCYRHLPGTTLDAVEINPDVIALRDVFRIPADD
HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCEEEEEHHHCCCCCC
ARFRVVCADGADHLERADVRTDVILHDAFVADGRRGRCTGGTFLDMCRARLSESGVLAIN
CEEEEEECCCHHHHHHHCCHHHEEEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
FMDDDPALPEHLEQLRSVFGSSYALVPCGDDNNFVAFAWKDGSRLPSLRILLERTLACPQ
EECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC
AGELKLAATARRMKHGEGIDPRRLVWRAQSHERWEIGA
CCCEEHHHHHHHHHCCCCCCHHHHEEECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]